PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC3AG043990.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

CPP

Protein Properties

Length: 483aa MW: 53049.2 Da PI: 8.388

Description

CPP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC3AG043990.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCR	41.6	2.4e-13	31	70	2	42
TCR 2 ekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNkeek 42 +kk CnC++skClk+YCeCfa+g +C+ C+C++C+N+ e+ TRIDC3AG043990.1 31 KKKCCNCRHSKCLKLYCECFASGIYCDG-CNCTNCFNNVEN 70 799***********************.******9875 PP
2	TCR	51.3	2.3e-16	115	153	1	39
TCR 1 kekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNk 39 k++kgC+Ckks ClkkYCeCf+a+ Cse+CkC dCkN TRIDC3AG043990.1 115 KHNKGCHCKKSGCLKKYCECFQANILCSENCKCMDCKNF 153 589***********************************5 PP

Sequence ? help Back to Top
Protein Sequence Length: 483 aa Download sequence
VQRPPVAVPL KPESPKPRGR LYDGKDGTPT KKKCCNCRHS KCLKLYCECF ASGIYCDGCN 60 CTNCFNNVEN EVARREAIEA TLERNPDAFR PKIGSSPHTN RNNMEVAGDV PLIGKHNKGC 120 HCKKSGCLKK YCECFQANIL CSENCKCMDC KNFDGSEDRK HLNLDHKNVI HMQQAANAAV 180 NGAIGATALS SPSTSRKRKH IDSSLDLSTK EHLAIRNGQL SQKNAMASDG SLPIGQSAHP 240 HMMGPFKVTY RPLLADIIQP GDVKELCKLL VTVSGQAAKA YTGRKIQEEK VAEKEDGVGG 300 SLALTNHDRE GKNKDQNHRK ISIDDHSSGG TDMGKASLDD SRPDCTDDQK SSRPMSPGTL 360 ALMCDEQDAM FATSQYAVAP PAIDVDQNRS ELYAEQERCV LTEFRDCLRK LVQYGRMKEE 420 KYSMAIRSEV TGHPGQVNGA PRIPYPKVDV PVVKTFPQSS SKHLVAGNPS IGHLDKRLKP 480 ENT

Sequence ? help Back to Top

Protein Sequence Length: 483 aa Download sequence

VQRPPVAVPL KPESPKPRGR LYDGKDGTPT KKKCCNCRHS KCLKLYCECF ASGIYCDGCN  60
CTNCFNNVEN EVARREAIEA TLERNPDAFR PKIGSSPHTN RNNMEVAGDV PLIGKHNKGC  120
HCKKSGCLKK YCECFQANIL CSENCKCMDC KNFDGSEDRK HLNLDHKNVI HMQQAANAAV  180
NGAIGATALS SPSTSRKRKH IDSSLDLSTK EHLAIRNGQL SQKNAMASDG SLPIGQSAHP  240
HMMGPFKVTY RPLLADIIQP GDVKELCKLL VTVSGQAAKA YTGRKIQEEK VAEKEDGVGG  300
SLALTNHDRE GKNKDQNHRK ISIDDHSSGG TDMGKASLDD SRPDCTDDQK SSRPMSPGTL  360
ALMCDEQDAM FATSQYAVAP PAIDVDQNRS ELYAEQERCV LTEFRDCLRK LVQYGRMKEE  420
KYSMAIRSEV TGHPGQVNGA PRIPYPKVDV PVVKTFPQSS SKHLVAGNPS IGHLDKRLKP  480
ENT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G29000.1	1e-126	CPP family protein

Link Out ? help Back to Top
Ensembl	TRIDC3AG043990.1