PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC3AG043990.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

CPP

Protein Properties

Length: 534aa MW: 58628.9 Da PI: 8.6401

Description

CPP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC3AG043990.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCR	41.5	2.7e-13	78	117	2	42
TCR 2 ekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNkeek 42 +kk CnC++skClk+YCeCfa+g +C+ C+C++C+N+ e+ TRIDC3AG043990.2 78 KKKCCNCRHSKCLKLYCECFASGIYCDG-CNCTNCFNNVEN 117 799***********************.******9875 PP
2	TCR	51.1	2.6e-16	162	200	1	39
TCR 1 kekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNk 39 k++kgC+Ckks ClkkYCeCf+a+ Cse+CkC dCkN TRIDC3AG043990.2 162 KHNKGCHCKKSGCLKKYCECFQANILCSENCKCMDCKNF 200 589***********************************5 PP

Sequence ? help Back to Top
Protein Sequence Length: 534 aa Download sequence
GVPHQLQPRG LPVMRPHQMV HATLPRPALP MAMPVPVPQA RSALSQPVQR PPVAVPLKPE 60 SPKPRGRLYD GKDGTPTKKK CCNCRHSKCL KLYCECFASG IYCDGCNCTN CFNNVENEVA 120 RREAIEATLE RNPDAFRPKI GSSPHTNRNN MEVAGDVPLI GKHNKGCHCK KSGCLKKYCE 180 CFQANILCSE NCKCMDCKNF DGSEDRKHLN LDHKNVIHMQ QAANAAVNGA IGATALSSPS 240 TSRKRKHIDS SLDLSTKEHL AIRNGQLSQV IYQKNAMASD GSLPIGQSAH PHMMGPFKVT 300 YRPLLADIIQ PGDVKELCKL LVTVSGQAAK AYTGRKIQEE KVAEKEDGVG GSLALTNHDR 360 EGKNKDQNHR KISIDDHSSG GTDMGKASLD DSRPDCTDDQ KSSRPMSPGT LALMCDEQDA 420 MFATSQYAVA PPAIDVDQNR SELYAEQERC VLTEFRDCLR KLVQYGRMKE EKYSMAIRSE 480 VTGHPGQVNG APRIPYPKVD VPVVKTFPQS SSKHLVAGNP SIGHLDKRLK PENT

Sequence ? help Back to Top

Protein Sequence Length: 534 aa Download sequence

GVPHQLQPRG LPVMRPHQMV HATLPRPALP MAMPVPVPQA RSALSQPVQR PPVAVPLKPE  60
SPKPRGRLYD GKDGTPTKKK CCNCRHSKCL KLYCECFASG IYCDGCNCTN CFNNVENEVA  120
RREAIEATLE RNPDAFRPKI GSSPHTNRNN MEVAGDVPLI GKHNKGCHCK KSGCLKKYCE  180
CFQANILCSE NCKCMDCKNF DGSEDRKHLN LDHKNVIHMQ QAANAAVNGA IGATALSSPS  240
TSRKRKHIDS SLDLSTKEHL AIRNGQLSQV IYQKNAMASD GSLPIGQSAH PHMMGPFKVT  300
YRPLLADIIQ PGDVKELCKL LVTVSGQAAK AYTGRKIQEE KVAEKEDGVG GSLALTNHDR  360
EGKNKDQNHR KISIDDHSSG GTDMGKASLD DSRPDCTDDQ KSSRPMSPGT LALMCDEQDA  420
MFATSQYAVA PPAIDVDQNR SELYAEQERC VLTEFRDCLR KLVQYGRMKE EKYSMAIRSE  480
VTGHPGQVNG APRIPYPKVD VPVVKTFPQS SSKHLVAGNP SIGHLDKRLK PENT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G29000.1	1e-126	CPP family protein

Link Out ? help Back to Top
Ensembl	TRIDC3AG043990.2