PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC3AG043990.4

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

CPP

Protein Properties

Length: 605aa MW: 65522.9 Da PI: 9.0325

Description

CPP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC3AG043990.4	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCR	41.2	3.2e-13	154	193	2	42
TCR 2 ekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNkeek 42 +kk CnC++skClk+YCeCfa+g +C+ C+C++C+N+ e+ TRIDC3AG043990.4 154 KKKCCNCRHSKCLKLYCECFASGIYCDG-CNCTNCFNNVEN 193 799***********************.******9875 PP
2	TCR	50.9	3.1e-16	238	276	1	39
TCR 1 kekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNk 39 k++kgC+Ckks ClkkYCeCf+a+ Cse+CkC dCkN TRIDC3AG043990.4 238 KHNKGCHCKKSGCLKKYCECFQANILCSENCKCMDCKNF 276 589***********************************5 PP

Sequence ? help Back to Top
Protein Sequence Length: 605 aa Download sequence
QAGAGAGGAG SGPPPRVPVP AVSTQPPIKK LVRQLDFNYG NPAMAAAAAA ASRTVQPRAL 60 QVGYPQPHQL RAALPIGVPH QLQPRGLPVM RPHQMVHATL PRPALPMAMP VPVPQARSAL 120 SQPVQRPPVA VPLKPESPKP RGRLYDGKDG TPTKKKCCNC RHSKCLKLYC ECFASGIYCD 180 GCNCTNCFNN VENEVARREA IEATLERNPD AFRPKIGSSP HTNRNNMEVA GDVPLIGKHN 240 KGCHCKKSGC LKKYCECFQA NILCSENCKC MDCKNFDGSE DRKHLNLDHK NVIHMQQAAN 300 AAVNGAIGAT ALSSPSTSRK RKHIDSSLDL STKEHLAIRN GQLSQKNAMA SDGSLPIGQS 360 AHPHMMGPFK VTYRPLLADI IQPGDVKELC KLLVTVSGQA AKAYTGIAPG RKIQEEKVAE 420 KEDGVGGSLA LTNHDREGKN KDQNHRKISI DDHSSGGTDM GKASLDDSRP DCTDDQKSSR 480 PMSPGTLALM CDEQDAMFAT SQYAVAPPAI DVDQNRSELY AEQERCVLTE FRDCLRKLVQ 540 YGRMKEEKYS MAIRSEVTGH PGQVNGAPRI PYPKVDVPVV KTFPQSSSKH LVAGNPSIGH 600 LDKRL

Sequence ? help Back to Top

Protein Sequence Length: 605 aa Download sequence

QAGAGAGGAG SGPPPRVPVP AVSTQPPIKK LVRQLDFNYG NPAMAAAAAA ASRTVQPRAL  60
QVGYPQPHQL RAALPIGVPH QLQPRGLPVM RPHQMVHATL PRPALPMAMP VPVPQARSAL  120
SQPVQRPPVA VPLKPESPKP RGRLYDGKDG TPTKKKCCNC RHSKCLKLYC ECFASGIYCD  180
GCNCTNCFNN VENEVARREA IEATLERNPD AFRPKIGSSP HTNRNNMEVA GDVPLIGKHN  240
KGCHCKKSGC LKKYCECFQA NILCSENCKC MDCKNFDGSE DRKHLNLDHK NVIHMQQAAN  300
AAVNGAIGAT ALSSPSTSRK RKHIDSSLDL STKEHLAIRN GQLSQKNAMA SDGSLPIGQS  360
AHPHMMGPFK VTYRPLLADI IQPGDVKELC KLLVTVSGQA AKAYTGIAPG RKIQEEKVAE  420
KEDGVGGSLA LTNHDREGKN KDQNHRKISI DDHSSGGTDM GKASLDDSRP DCTDDQKSSR  480
PMSPGTLALM CDEQDAMFAT SQYAVAPPAI DVDQNRSELY AEQERCVLTE FRDCLRKLVQ  540
YGRMKEEKYS MAIRSEVTGH PGQVNGAPRI PYPKVDVPVV KTFPQSSSKH LVAGNPSIGH  600
LDKRL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G29000.1	1e-124	CPP family protein

Link Out ? help Back to Top
Ensembl	TRIDC3AG043990.4