PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3AG045310.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family LBD
Protein Properties Length: 193aa    MW: 20386.1 Da    PI: 8.1346
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3AG045310.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260111.84.6e-3541135191
            DUF260   1 aCaaCkvlrrkCakdCvlapyf....paeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleq 89 
                       +C aCk+lrr+C+++Cv+ap+f     ++ +++fa+vh++FGasnv kll+++p   r+d++++++yeA+ar+ dPvyG+vg+il+lq+q+  
  TRIDC3AG045310.2  41 PCGACKFLRRRCVPGCVFAPHFsgsgRERGAAQFAAVHRVFGASNVAKLLSRVPVALRRDTARTVCYEAQARVADPVYGCVGTILALQHQVTA 133
                       7*********************766333448***********************************************************987 PP

            DUF260  90 lk 91 
                       l 
  TRIDC3AG045310.2 134 LT 135
                       75 PP
Sequence ? help Back to Top
Protein Sequence    Length: 193 aa     Download sequence    
SAMQEEPAPP RKRGGAVHGS AAREQQQQAD ETSSSAGPGA PCGACKFLRR RCVPGCVFAP  60
HFSGSGRERG AAQFAAVHRV FGASNVAKLL SRVPVALRRD TARTVCYEAQ ARVADPVYGC  120
VGTILALQHQ VTALTTLQKT LALASTHPDG AEQLAVLQPA YSAASAPSQM VNYDDLPQAV  180
DFMDVEPQMR GLE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G03760.13e-43LBD family protein