PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3AG045510.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family FAR1
Protein Properties Length: 203aa    MW: 23258.4 Da    PI: 9.9406
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3AG045510.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR170.34.5e-2228108190
              FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 
                       ++Yn YA +vGFsvrks++k++  +++i ++  vCs+eg+r+++++k         +trtgC+a+++ + +kdg w v+kl +eHnH la
  TRIDC3AG045510.1  28 DMYNVYAAKVGFSVRKSHTKRR-GDKSISQKYIVCSNEGHRDTQSSK--------DTTRTGCEARIQFSVNKDGIWTVQKLITEHNHYLA 108
                       58**************998776.8888**************998776........99******************************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 203 aa     Download sequence    
KNAIDKVGQT LIVPKVGLAF DSEDSAYDMY NVYAAKVGFS VRKSHTKRRG DKSISQKYIV  60
CSNEGHRDTQ SSKDTTRTGC EARIQFSVNK DGIWTVQKLI TEHNHYLASP NKVHKLRSQR  120
RVIEADIHLI GQIREAGMKP SQVYDFMVAF YGGPDKVPFS KMDCNNEIGR ERKKYLESND  180
AQTLLGYLKN KQREDPTFFM PFR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.14e-33FAR1 family protein