PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3AG046510.6
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bHLH
Protein Properties Length: 350aa    MW: 37410.5 Da    PI: 5.9753
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3AG046510.6genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH14.18.5e-05233276654
                       HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
               HLH   6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                         + + R +++ +++  L++l+ +      +K + a++L +A eYIk L
  TRIDC3AG046510.6 233 TLMAKVRKEKLGDRITALQQLVSPF-----GKTDTASVLHEANEYIKFL 276
                       566788999999***********98.....8****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 350 aa     Download sequence    
MADEWWSGSQ RSHGTSACSA APLMDTGHAA TCGWTSPAAE STSSITFQDP HRSSSTIAHQ  60
PSSDAASSIG DAHMDWTHAF LSGRSDASFQ AVLQDDMPAS MTTRPLFRAH QPAVDEAVMS  120
NPFRDMSHSF SLLDQVPAAS SPYGTAPLQG MFDNAGASRN VSVLGECQSS TSYDGTAAMQ  180
LNQAATQMLG GGAQLQYLSG SGGYLPFGGA PLSSQLLLQA LQPKTSYSSS SNTLMAKVRK  240
EKLGDRITAL QQLVSPFGKT DTASVLHEAN EYIKFLHDQV ASLTYPYLKN VNPLQQFQQK  300
GSENAKDDGG EPKKDLRSRG LCLVPVATTY TVASETVPEF WYPTFGGTFR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G20640.12e-39bHLH family protein