PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC3AG048460.3

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

MYB

Protein Properties

Length: 514aa MW: 55683.9 Da PI: 4.7794

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC3AG048460.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	52.6	1e-16	4	51	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT Ed +lvd+vk++G g+W+++ + g+ R++k+c++rw ++l TRIDC3AG048460.3 4 KGPWTSAEDAILVDYVKKHGEGNWNAVQKNTGLFRCGKSCRLRWANHL 51 79******************************************9986 PP
2	Myb_DNA-binding	43.1	1e-13	57	101	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +g++T+eE+ l+++++ ++G++ W++ a++ gRt++++k++w++ TRIDC3AG048460.3 57 KGAFTPEEERLIIQLHSKMGNK-WARMAAHQLPGRTDNEIKNYWNT 101 799*****************.988555*********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 514 aa Download sequence
PLKKGPWTSA EDAILVDYVK KHGEGNWNAV QKNTGLFRCG KSCRLRWANH LRPNLKKGAF 60 TPEEERLIIQ LHSKMGNKWA RMAAHQLPGR TDNEIKNYWN TRIKRCQRAG LPIYPASVCN 120 QSSNEDQQGS SDFNCGENLS SDLLNGNGLY LPDFTCDNFI ANSEALSYAP QLSAVSISSL 180 LGQSFASKNC GFMDQVNQAG MLKQSDPLLP GLSDTINGAL SSVDQFSNDS ENLKKALGFD 240 YLHEANSSSK MIAPFGGALT GSHAFLNGTF STSRTINGPL KMELPSLQDT ESDPNSWLKY 300 TVAPAMQPTE LVDPYLQSPT ATPSVKSECV SPRNSGLLEE LLHEAQGLKS GKNQQLSVRS 360 SSSSVSTPCD TTVVSPEFDI CQDYWEEPLN EYAPFSGNSL TGSTAPVSAA PPDVFQLSKI 420 SPAQSPSLGS GEQAMEPAYE PGAGDTSSHP ENFRPDALFS GNTTDSSVFN NAIAMLLGND 480 MNTDCKPVFG DGIVFDTSPW SNMPHACQMS EEFK

Sequence ? help Back to Top

Protein Sequence Length: 514 aa Download sequence

PLKKGPWTSA EDAILVDYVK KHGEGNWNAV QKNTGLFRCG KSCRLRWANH LRPNLKKGAF  60
TPEEERLIIQ LHSKMGNKWA RMAAHQLPGR TDNEIKNYWN TRIKRCQRAG LPIYPASVCN  120
QSSNEDQQGS SDFNCGENLS SDLLNGNGLY LPDFTCDNFI ANSEALSYAP QLSAVSISSL  180
LGQSFASKNC GFMDQVNQAG MLKQSDPLLP GLSDTINGAL SSVDQFSNDS ENLKKALGFD  240
YLHEANSSSK MIAPFGGALT GSHAFLNGTF STSRTINGPL KMELPSLQDT ESDPNSWLKY  300
TVAPAMQPTE LVDPYLQSPT ATPSVKSECV SPRNSGLLEE LLHEAQGLKS GKNQQLSVRS  360
SSSSVSTPCD TTVVSPEFDI CQDYWEEPLN EYAPFSGNSL TGSTAPVSAA PPDVFQLSKI  420
SPAQSPSLGS GEQAMEPAYE PGAGDTSSHP ENFRPDALFS GNTTDSSVFN NAIAMLLGND  480
MNTDCKPVFG DGIVFDTSPW SNMPHACQMS EEFK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G06100.1	9e-80	MYB family protein

Link Out ? help Back to Top
Ensembl	TRIDC3AG048460.3