PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3AG048940.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family NAC
Protein Properties Length: 252aa    MW: 28506.5 Da    PI: 11.0264
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3AG048940.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM157.94.3e-4911246128
               NAM   6 rFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk..k 96 
                       rFhPtd+elvv+yL++kv+g++ ++  +i+evd+yk++PwdLp+++  +++ewyfF++rd+ky++g+r+nr++ +gyWkatg dk+v  +  +
  TRIDC3AG048940.1   1 RFHPTDDELVVHYLCRKVAGQPQPV-PIIAEVDLYKFNPWDLPERALFGSREWYFFTPRDRKYPNGSRPNRSAGTGYWKATGADKPVAPResG 92 
                       8*********************999.88***************8777899*************************************998778 PP

               NAM  97 gelvglkktLvfykgrapkgektdWvmheyrl 128
                       g++vg+kk Lvfy+grap+g+ktdW+mheyr+
  TRIDC3AG048940.1  93 GRTVGIKKALVFYSGRAPRGVKTDWIMHEYRI 124
                       999***************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 252 aa     Download sequence    
RFHPTDDELV VHYLCRKVAG QPQPVPIIAE VDLYKFNPWD LPERALFGSR EWYFFTPRDR  60
KYPNGSRPNR SAGTGYWKAT GADKPVAPRE SGGRTVGIKK ALVFYSGRAP RGVKTDWIMH  120
EYRIAEADRA PGKKGSLKVT PASSFQFALC SPTILINQSI LNTDPSLSVM CGYCSWTNGC  180
CAGCTTRRTT GRSSRWSRTW LWRPGRTGRS WTRWRPTPCP TASRRTTPPR STAPPACSSM  240
VSWTWRSSRR GW
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G77450.11e-68NAC family protein