PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC3AG049280.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

WOX

Protein Properties

Length: 242aa MW: 27312.4 Da PI: 6.7248

Description

WOX family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC3AG049280.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	67.2	2.2e-21	70	130	2	57
T--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 2 rkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 r+R+t+t+ ql++Le+ F + n +ps++++++++++l +++e++V++WFqNrRa+ k+ TRIDC3AG049280.2 70 RQRWTPTQMQLQILESIFDQgNGTPSKQKIKDITAELsqhgQISETNVYNWFQNRRARSKR 130 89***************99************************************97 PP
2	Wus_type_Homeobox	103.4	1.6e-33	69	132	2	65
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 ar+RWtPt+ Q++iLe+++++G tP+k++i++itaeL+++G+i+++NV++WFQNr+aR+++kq TRIDC3AG049280.2 69 ARQRWTPTQMQLQILESIFDQGNGTPSKQKIKDITAELSQHGQISETNVYNWFQNRRARSKRKQ 132 789***********************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 242 aa Download sequence
GEALGYVKVM TDEQMEVLRK QISIYATICE QLVEMHRALT AHQDSIAGMR LGNLYCDPLM 60 VHGGHKITAR QRWTPTQMQL QILESIFDQG NGTPSKQKIK DITAELSQHG QISETNVYNW 120 FQNRRARSKR KQAASSLPSN TESEAEGDED SPTDKKPRSD GSQQQGMAVR AHNPERISEM 180 HRHFDAAERE QVRGPMYGSS NDNGPRPSGG LGQMSFYENV MSNPRIDQFF QYRTGESFDM 240 SG

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	124	132	RRARSKRKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G35550.1	2e-62	WOX family protein

Link Out ? help Back to Top
Ensembl	TRIDC3AG049280.2