PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC3AG049900.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

LBD

Protein Properties

Length: 146aa MW: 15231.9 Da PI: 4.258

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC3AG049900.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	54.7	2.9e-17	1	56	45	100
DUF260 45 llkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallkee 100 +l ++pe er da+sslvyeA+ r+rdPvyG++g i+ lqqq++ l+ael+++++e TRIDC3AG049900.1 1 MLLEVPEAERADAASSLVYEANLRLRDPVYGCMGAISMLQQQVNALEAELQAVRAE 56 57789**********************************************99987 PP

Sequence ? help Back to Top
Protein Sequence Length: 146 aa Download sequence
MLLEVPEAER ADAASSLVYE ANLRLRDPVY GCMGAISMLQ QQVNALEAEL QAVRAEIFKH 60 RYRQAGVGVG AAHLIVDDDV SAAAAGGFRA PATSLVHTAD VVSVAEAGQE VATMPSTATA 120 TAYAAGQPSS TDYSSLDTSE HDAYFG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G30340.1	1e-27	LBD family protein

Link Out ? help Back to Top
Ensembl	TRIDC3AG049900.1