PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3AG049900.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family LBD
Protein Properties Length: 99aa    MW: 11177.9 Da    PI: 7.5587
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3AG049900.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260112.13.8e-3519011100
            DUF260  11 kCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallkee 100
                       +Ca++C++apyf  ++p+kfa+vhk+FGasnv+k+l ++pe er da+sslvyeA+ r+rdPvyG++g i+ lqqq++ l+ael+++++e
  TRIDC3AG049900.2   1 RCAHECPFAPYFSPHEPHKFAAVHKVFGASNVSKMLLEVPEAERADAASSLVYEANLRLRDPVYGCMGAISMLQQQVNALEAELQAVRAE 90 
                       6************************************************************************************99987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 99 aa     Download sequence    
RCAHECPFAP YFSPHEPHKF AAVHKVFGAS NVSKMLLEVP EAERADAASS LVYEANLRLR  60
DPVYGCMGAI SMLQQQVNAL EAELQAVRAE IFKHRYRMM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G30340.19e-55LBD family protein