PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3AG050810.10
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family NF-YB
Protein Properties Length: 108aa    MW: 12072.7 Da    PI: 4.9437
Description NF-YB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3AG050810.10genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YB182.72.9e-5714107194
              NF-YB   1 vreqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyre 92 
                        vreqdrflPian+srimkk++Pan+ki+kdaket+qecvsefisfvtseasdkcq+ekrktingddllwa+atlGfe+yv+plk+yl+kyr+
  TRIDC3AG050810.10  14 VREQDRFLPIANISRIMKKAVPANGKIAKDAKETLQECVSEFISFVTSEASDKCQKEKRKTINGDDLLWAMATLGFEEYVDPLKIYLQKYRD 105
                        69****************************************************************************************** PP

              NF-YB  93 le 94 
                        +e
  TRIDC3AG050810.10 106 ME 107
                        98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 108 aa     Download sequence    
ADDDSGSPRG GGGVREQDRF LPIANISRIM KKAVPANGKI AKDAKETLQE CVSEFISFVT  60
SEASDKCQKE KRKTINGDDL LWAMATLGFE EYVDPLKIYL QKYRDMEP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G53340.16e-62NF-YB family protein