PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3AG050810.3
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family NF-YB
Protein Properties Length: 162aa    MW: 17779.4 Da    PI: 9.8508
Description NF-YB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3AG050810.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YB179.52.9e-5662155194
             NF-YB   1 vreqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrel 93 
                       vreqdrflPian+srimkk++Pan+ki+kdaket+qecvsefisfvtseasdkcq+ekrktingddllwa+atlGfe+yv+plk+yl+kyr++
  TRIDC3AG050810.3  62 VREQDRFLPIANISRIMKKAVPANGKIAKDAKETLQECVSEFISFVTSEASDKCQKEKRKTINGDDLLWAMATLGFEEYVDPLKIYLQKYRDV 154
                       69*****************************************************************************************98 PP

             NF-YB  94 e 94 
                        
  TRIDC3AG050810.3 155 I 155
                       5 PP
Sequence ? help Back to Top
Protein Sequence    Length: 162 aa     Download sequence    
PFSSVGSPIP HPSSQRQPPS SSSPLPSLPS APPRARARVF IRVSGRRMAD DDSGSPRGGG  60
GVREQDRFLP IANISRIMKK AVPANGKIAK DAKETLQECV SEFISFVTSE ASDKCQKEKR  120
KTINGDDLLW AMATLGFEEY VDPLKIYLQK YRDVIMALAR CC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G53340.12e-59NF-YB family protein