PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3AG050810.6
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family NF-YB
Protein Properties Length: 165aa    MW: 18043.2 Da    PI: 7.5017
Description NF-YB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3AG050810.6genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YB185.25e-5817113197
             NF-YB   1 vreqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrel 93 
                       vreqdrflPian+srimkk++Pan+ki+kdaket+qecvsefisfvtseasdkcq+ekrktingddllwa+atlGfe+yv+plk+yl+kyr++
  TRIDC3AG050810.6  17 VREQDRFLPIANISRIMKKAVPANGKIAKDAKETLQECVSEFISFVTSEASDKCQKEKRKTINGDDLLWAMATLGFEEYVDPLKIYLQKYRDM 109
                       69******************************************************************************************* PP

             NF-YB  94 egek 97 
                       eg++
  TRIDC3AG050810.6 110 EGDS 113
                       **97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 165 aa     Download sequence    
RRMADDDSGS PRGGGGVREQ DRFLPIANIS RIMKKAVPAN GKIAKDAKET LQECVSEFIS  60
FVTSEASDKC QKEKRKTING DDLLWAMATL GFEEYVDPLK IYLQKYRDME GDSKLTSKSG  120
EGSVKKDIIG AHSGATSSNA QAMVQHGGYA QGMGYMQPQY HNGDT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G53340.12e-69NF-YB family protein