PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC3AG050810.9

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

NF-YB

Protein Properties

Length: 154aa MW: 17020.6 Da PI: 9.8508

Description

NF-YB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC3AG050810.9	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NF-YB	179.7	2.5e-56	54	147	1	94
NF-YB 1 vreqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrel 93 vreqdrflPian+srimkk++Pan+ki+kdaket+qecvsefisfvtseasdkcq+ekrktingddllwa+atlGfe+yv+plk+yl+kyr++ TRIDC3AG050810.9 54 VREQDRFLPIANISRIMKKAVPANGKIAKDAKETLQECVSEFISFVTSEASDKCQKEKRKTINGDDLLWAMATLGFEEYVDPLKIYLQKYRDV 146 69*****************************************************************************************98 PP NF-YB 94 e 94 TRIDC3AG050810.9 147 I 147 5 PP

Sequence ? help Back to Top
Protein Sequence Length: 154 aa Download sequence
IPHPSSQRQP PSSSSPLPSL PSAPPRARAR VFIRVSGRRM ADDDSGSPRG GGGVREQDRF 60 LPIANISRIM KKAVPANGKI AKDAKETLQE CVSEFISFVT SEASDKCQKE KRKTINGDDL 120 LWAMATLGFE EYVDPLKIYL QKYRDVIMAL ARCC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G53340.1	2e-59	NF-YB family protein

Link Out ? help Back to Top
Ensembl	TRIDC3AG050810.9