PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC3AG051270.3

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

C2H2

Protein Properties

Length: 139aa MW: 14053.9 Da PI: 11.8458

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC3AG051270.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	12.3	0.00053	78	100	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++Cp Cg F L H+r+H TRIDC3AG051270.3 78 HECPVCGLEFAVGQALGGHMRRH 100 79********************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 139 aa Download sequence
GQPGHGPPAH APRAAAPAAP APARRRRGGA GDGRRPRVRV QDVQPAVPHV PGARRAPRQP 60 QAPQAAPSAA APARPRAHEC PVCGLEFAVG QALGGHMRRH RVEAEAATNA PSSKAAAPET 120 ALASCDAGGI CLDLNLTPS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G28710.1	6e-12	C2H2 family protein

Link Out ? help Back to Top
Ensembl	TRIDC3AG051270.3