PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC3AG051280.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

C2H2

Protein Properties

Length: 206aa MW: 21723.9 Da PI: 9.3709

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC3AG051280.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	11.1	0.0012	48	70	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C+ C++ F++ L H +H TRIDC3AG051280.1 48 FECKTCNRQFPTFQALGGHRASH 70 89**********99999998887 PP
2	zf-C2H2	11.5	0.00096	112	134	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++Cp Cg F L H+r+H TRIDC3AG051280.1 112 HECPVCGLEFAVGQALGGHMRRH 134 79********************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 206 aa Download sequence
MSKRGRGVWD VELGSFDTAR LLMLLAQQQH HQRGVAGAPQ AMGGGRMFEC KTCNRQFPTF 60 QALGGHRASH KRHRLQHPPP QHALVGVGDD AALCLGRRAP QAPPQPPRPR VHECPVCGLE 120 FAVGQALGGH MRRHRVEAEA VAGASATSIK AAATTEMVVA SCDDGGICLD LNLTPSENCA 180 KCRSAAALVA ATGQGVHKAL GGHMRG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G28710.1	6e-25	C2H2 family protein

Link Out ? help Back to Top
Ensembl	TRIDC3AG051280.1