PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC3AG051560.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

WOX

Protein Properties

Length: 181aa MW: 20174.7 Da PI: 10.7375

Description

WOX family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC3AG051560.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	48.9	1.1e-15	42	102	3	57
--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHH.HHHHHC CS Homeobox 3 kRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNr.Rakekk 57 R+ +t+eq+ +Le l+++ r+p+aee+ + +++l ++ ++V++WFqN R+k+k+ TRIDC3AG051560.2 42 ARWVPTREQIAVLEGLYRQgMRTPTAEEIHQVTARLqehgPIEGKNVFYWFQNGlRQKQKQ 102 7***************99************99999**********55888886 PP
2	Wus_type_Homeobox	92.8	3.2e-30	41	102	3	65
Wus_type_Homeobox 3 rtRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 ++RW Pt eQi +Le ly++G+rtP++eei+++ta+L+e+G ie+kNVfyWFQN R++qkq TRIDC3AG051560.2 41 NARWVPTREQIAVLEGLYRQGMRTPTAEEIHQVTARLQEHGPIEGKNVFYWFQNG-LRQKQKQ 102 78****************************************************6.4566554 PP

Sequence ? help Back to Top
Protein Sequence Length: 181 aa Download sequence
MESVEHHDEA ATGLSLSPPP TSAPLSPPIS PNSAAVAALA NARWVPTREQ IAVLEGLYRQ 60 GMRTPTAEEI HQVTARLQEH GPIEGKNVFY WFQNGLRQKQ KQQQQQRSDY FARQIHRPQP 120 LPTLRRTPGN SFSPVQLQAP PAPNTPACNR EGTSAHKPSP FMRSARHLIK SAFGNWHARL 180 D

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G59340.1	7e-23	WOX family protein

Link Out ? help Back to Top
Ensembl	TRIDC3AG051560.2