PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3AG051570.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family WOX
Protein Properties Length: 255aa    MW: 28745.4 Da    PI: 9.9033
Description WOX family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3AG051570.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox39.31.1e-12563457
                      -SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
          Homeobox  4 RttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57
                       + +t+eql +Le l+++  r+p+aee+ +  ++l     ++ ++V+ WFqN+  + ++
  TRIDC3AG051570.2  5 HWVPTREQLAVLEGLYRQgMRTPTAEEIHQVMARLqehgPIDGKNVFHWFQNQQVRLRQ 63
                      699**************99****************99999************9888775 PP
2Wus_type_Homeobox87.91e-28364364
  Wus_type_Homeobox  3 rtRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqk 64
                       +t W Pt eQ+ +Le ly++G+rtP++eei+++ a+L+e+G i++kNVf+WFQN++ R rq+
   TRIDC3AG051570.2  3 NTHWVPTREQLAVLEGLYRQGMRTPTAEEIHQVMARLQEHGPIDGKNVFHWFQNQQVRLRQR 64
                       689*********************************************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 255 aa     Download sequence    
LVNTHWVPTR EQLAVLEGLY RQGMRTPTAE EIHQVMARLQ EHGPIDGKNV FHWFQNQQVR  60
LRQREKRQRS DYFARQFRRP HPLPVLHSPS GHPISPVQLQ APPAPNTPTC NGEAMYMQQP  120
CYMSGSAAQD TANATYYSQM QPQIMYPSAE MMAHGNVQAQ AQAAMYYQAA SPNNSNTQQL  180
RILQCPPAAG SYGAPDAYSH RPVLLNLFPQ YPTFANRRKT RRVGSVGSVR PSTSGSISWE  240
TESPKIPNRH IAIDL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G59340.18e-24WOX family protein