PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3AG051860.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family GRAS
Protein Properties Length: 720aa    MW: 80319 Da    PI: 6.4431
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3AG051860.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS374.21.6e-1143457142374
              GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfs 94 
                       ++lL++cA+ vs +d + a+ lL++++++as +gd  qRla++f+++L+arla+++s++yk  + s+ +    +++l+a++l+  ++P+ k+s
  TRIDC3AG051860.2 345 ETLLIHCAQSVSIDDRRSATDLLKQIRQHASATGDGDQRLAHCFANGLEARLAGNGSQIYKLHTISRFA---CTDVLKAYQLYLAACPFKKIS 434
                       789**********************************************************99999999...9******************** PP

              GRAS  95 hltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakr 185
                       h  aNq+I++ave++++vHi+Df++ +G+QWp+L+q L++R +gpp+lRiT+++ p++g   +e++ee+g+ L+++A++++vpf+++  +a++
  TRIDC3AG051860.2 435 HYFANQTIMNAVEKAKKVHIVDFGVYYGFQWPCLIQRLSKRLGGPPELRITAIDTPQPGfrPAERIEEIGRYLSDYAQTFKVPFKYHG-IASQ 526
                       ****************************************************************************************.7*** PP

              GRAS 186 ledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpre 278
                       +e++++e+L+++++E l+Vn++++ ++l+desv  es+r+ vL+++++++P+v+++   + ++n++ F+ rf eal  +sa fd+lea++pr+
  TRIDC3AG051860.2 527 FEAVRVEDLHIEKDEILIVNSMFRFKTLMDESVVAESPRNMVLNTIRKMKPHVFIHGVTNGSYNAPFFVSRFREALFQFSAHFDMLEANIPRD 619
                       ********************************************************************************************* PP

              GRAS 279 seerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvS 371
                       +eer  +E  +++re+ nv++ceg er er et+++W+ r ++aGFk++pl+ +++k a+  ++ ++++ + ++e++ +l++gWk+r L+++S
  TRIDC3AG051860.2 620 NEERLLIESTIFSREAINVISCEGMERMERPETYKQWQVRNQRAGFKQLPLDPEIMKRAREKVKCYHKN-FIIDEDNRWLLQGWKGRILYALS 711
                       ****************************************************************99966.*********************** PP

              GRAS 372 aWr 374
                        W+
  TRIDC3AG051860.2 712 TWK 714
                       **8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 720 aa     Download sequence    
AGQAHPQPDD SEVFSDIVLG YINRMLMAED IDEKFDHYPA HPALLAAEKP FLEILADQPP  60
CSGGSTVESP DGSSVTTNSF NSHGSCNCAA PSGGGLGAMQ APPALEFPTA EFLQPPQFYQ  120
DLSPESCVVE AGGAWPPYDA MEFNPLPDAL LSQSSSFASS NGSSVAFSEG FEPWLSTAGA  180
VPDAALSDFV LQSQQAAQFS RGFEEASRFL PQESKLVIDV DSLPSVWVKE DKKVVEVKKE  240
KADSEVAIHR GKKHFYGDDL DADEVRCCKH SAPVVDADHL VREMMDKVLL CNGETCSRGV  300
KELREALQHD VAAHSGGAHG KGSGHGKGRG KKQVKQPKKE VVDLETLLIH CAQSVSIDDR  360
RSATDLLKQI RQHASATGDG DQRLAHCFAN GLEARLAGNG SQIYKLHTIS RFACTDVLKA  420
YQLYLAACPF KKISHYFANQ TIMNAVEKAK KVHIVDFGVY YGFQWPCLIQ RLSKRLGGPP  480
ELRITAIDTP QPGFRPAERI EEIGRYLSDY AQTFKVPFKY HGIASQFEAV RVEDLHIEKD  540
EILIVNSMFR FKTLMDESVV AESPRNMVLN TIRKMKPHVF IHGVTNGSYN APFFVSRFRE  600
ALFQFSAHFD MLEANIPRDN EERLLIESTI FSREAINVIS CEGMERMERP ETYKQWQVRN  660
QRAGFKQLPL DPEIMKRARE KVKCYHKNFI IDEDNRWLLQ GWKGRILYAL STWKANPQSS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G37650.11e-171GRAS family protein