PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3AG053790.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family NAC
Protein Properties Length: 258aa    MW: 28071.2 Da    PI: 5.7013
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3AG053790.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM135.14.6e-4281421128
               NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk.....kvka....eekewyfFskrdkkyatgkrknratksgyWk 84 
                       lppG+rF Pt+eel+++yL++k++g++ ++e+vi+ vd+y+v+P +L +     +  +    e + w++F+ r++++a+g r++r+t sgyWk
  TRIDC3AG053790.1   8 LPPGYRFYPTEEELICFYLRNKLDGSRGDIERVIPVVDVYSVDPLQLSEiherlR--GggggEGEPWFYFCARQEREARGGRPSRTTPSGYWK 98 
                       79****************************99***************85456541..244446679*************************** PP

               NAM  85 atgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                       a g+   v+s++++ +gl+kt+vfy+grap+g+kt+W m+eyr+
  TRIDC3AG053790.1  99 AAGTPGVVYSADRRPIGLRKTMVFYRGRAPSGTKTKWKMNEYRA 142
                       ******************************************95 PP
Sequence ? help Back to Top
Protein Sequence    Length: 258 aa     Download sequence    
DCHMADGLPP GYRFYPTEEE LICFYLRNKL DGSRGDIERV IPVVDVYSVD PLQLSEIHER  60
LRGGGGGEGE PWFYFCARQE REARGGRPSR TTPSGYWKAA GTPGVVYSAD RRPIGLRKTM  120
VFYRGRAPSG TKTKWKMNEY RAFQHEHNDD AAGAPTATGG PHAAAPPNLP PQLRSEFSLC  180
RLYTKSGTLR QFDRRPVAAA ARGDIPGPST AATASPDDGD GSGGSMQPLE EDLMEGAGGD  240
PYGDDIATLA ALLYWSTD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G22380.16e-63NAC family protein