PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3AG053790.3
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family NAC
Protein Properties Length: 187aa    MW: 20831.4 Da    PI: 8.9848
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3AG053790.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM136.51.8e-4251391128
               NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk.....kvka....eekewyfFskrdkkyatgkrknratksgyWk 84 
                       lppG+rF Pt+eel+++yL++k++g++ ++e+vi+ vd+y+v+P +L +     +  +    e + w++F+ r++++a+g r++r+t sgyWk
  TRIDC3AG053790.3   5 LPPGYRFYPTEEELICFYLRNKLDGSRGDIERVIPVVDVYSVDPLQLSEiherlR--GggggEGEPWFYFCARQEREARGGRPSRTTPSGYWK 95 
                       79****************************99***************85456541..244446679*************************** PP

               NAM  85 atgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                       a g+   v+s++++ +gl+kt+vfy+grap+g+kt+W m+eyr+
  TRIDC3AG053790.3  96 AAGTPGVVYSADRRPIGLRKTMVFYRGRAPSGTKTKWKMNEYRA 139
                       ******************************************95 PP
Sequence ? help Back to Top
Protein Sequence    Length: 187 aa     Download sequence    
MADGLPPGYR FYPTEEELIC FYLRNKLDGS RGDIERVIPV VDVYSVDPLQ LSEIHERLRG  60
GGGGEGEPWF YFCARQEREA RGGRPSRTTP SGYWKAAGTP GVVYSADRRP IGLRKTMVFY  120
RGRAPSGTKT KWKMNEYRAF QHEHNDDAAG APTATGGPHA AAPPNLPPQI VPINRDAHHH  180
SPTYINI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G22380.15e-54NAC family protein