PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3AG053800.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB
Protein Properties Length: 236aa    MW: 26659.6 Da    PI: 10.0897
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3AG053800.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding25.14e-0870116145
                       TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHH CS
   Myb_DNA-binding   1 rgrWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwq 45 
                       r +W +eEd+ +  a   l+ +   +W+++a++++ gRt+ +  +++q
  TRIDC3AG053800.1  70 RRPWAKEEDKAFEAALVTLPDHapdRWERVAARLP-GRTPQEAWEHYQ 116
                       679*****************99*************.****98777777 PP
2Myb_DNA-binding45.12.4e-14169213347
                       SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
   Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                       +W++eE++l++d+ +++G g+W+ I+r     Rt+ q+ s+ qky
  TRIDC3AG053800.1 169 PWSEEEHKLFLDGLEKYGRGDWRNISRFAVRSRTPTQVASHAQKY 213
                       7*******************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 236 aa     Download sequence    
TNRTKQPHGA AQPVHEHTQR HPRPARQLIG AAPRTWRLGV VSSPQGGGPE RRRGEEAMDL  60
YYQQAAPAAR RPWAKEEDKA FEAALVTLPD HAPDRWERVA ARLPGRTPQE AWEHYQALVA  120
DVDLIERGAV DTPDCWDFDD DGDGRATVAS SRGRPAGKAR GEERRRGIPW SEEEHKLFLD  180
GLEKYGRGDW RNISRFAVRS RTPTQVASHA QKYFIRQANA ATRDSKRKSI HDITTP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G58900.16e-42MYB_related family protein