PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC3AG053800.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

MYB

Protein Properties

Length: 156aa MW: 18048.1 Da PI: 9.7279

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC3AG053800.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	26.2	1.9e-08	19	65	1	45
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwq 45 r +W +eEd+ + a l+ + +W+++a++++ gRt+ + +++q TRIDC3AG053800.2 19 RRPWAKEEDKAFEAALVTLPDHapdRWERVAARLP-GRTPQEAWEHYQ 65 679***************99*********.**98777777 PP
2	Myb_DNA-binding	46.1	1.1e-14	89	133	3	47
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +W++eE++l++d+ +++G g+W+ I+r Rt+ q+ s+ qky TRIDC3AG053800.2 89 PWSEEEHKLFLDGLEKYGRGDWRNISRFAVRSRTPTQVASHAQKY 133 7*******************************************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 156 aa Download sequence
RRGEEAMDLY YQQAAPAARR PWAKEEDKAF EAALVTLPDH APDRWERVAA RLPGRTPQEA 60 WEHYQALVAD VDLIERGAAR GEERRRGIPW SEEEHKLFLD GLEKYGRGDW RNISRFAVRS 120 RTPTQVASHA QKYFIRQANA ATRDSKRKSI HDITTP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G04760.1	5e-40	MYB family protein

Link Out ? help Back to Top
Ensembl	TRIDC3AG053800.2