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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
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| TF ID | TRIDC3AG055030.10 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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| Family | MYB_related | ||||||||
| Protein Properties | Length: 88aa MW: 9818.3 Da PI: 10.6668 | ||||||||
| Description | MYB_related family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
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| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | Myb_DNA-binding | 22.7 | 2.4e-07 | 24 | 48 | 1 | 26 |
TSSS-HHHHHHHHHHHHHTTTT-HHH CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWkt 26
rg++T ++del+++++++lG++ W+t
TRIDC3AG055030.10 24 RGNFTDDDDELIIKLHALLGNN-WNT 48
89******************99.*97 PP
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| Sequence ? help Back to Top |
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| Protein Sequence Length: 88 aa Download sequence |
AGLLRCGKSC RLRWMNYLRP DLKRGNFTDD DDELIIKLHA LLGNNWNTHI KRKLLNRGMD 60 PHTHRPISAA SGLTASTTAP VFPSSPAP |
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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| Hit ID | E-value | Description | ||||
| AT4G38620.1 | 1e-34 | MYB family protein | ||||
| Link Out ? help Back to Top | |
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| Ensembl | TRIDC3AG055030.10 |
| ©2010-2022, Center
for Bioinformatics, Peking University Last Modified: 2022-12-08 Questions or Comments, please contact  |
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