PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC3AG055770.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

ARR-B

Protein Properties

Length: 519aa MW: 57428.6 Da PI: 5.2291

Description

ARR-B family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC3AG055770.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	81.9	7.2e-26	126	179	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k+r++W+ +LH++Fv+av+q+ G +k Pk+il+lm+v+gLt+e+v+SHLQkYRl TRIDC3AG055770.2 126 KARVVWSVDLHQKFVNAVNQI-GFDKVGPKKILDLMNVPGLTRENVASHLQKYRL 179 68*****************.9*****************************8 PP
2	Myb_DNA-binding	40.6	5.8e-13	128	178	1	48
TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 r W+ ++++++v+av+q G + +k+I m+ g+t++++ s++qky+ TRIDC3AG055770.2 128 RVVWSVDLHQKFVNAVNQIGFDkvGPKKILDLMNvPGLTRENVASHLQKYR 178 678***********************************************7 PP
3	Response_reg	33.3	2.6e-12	1	56	53	109
CTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTTESEEEESS--HHHHHH CS Response_reg 53 mpgmdGlellkeireeepklpiivvtahgeeedalealkaGakdflsKpfdpeelvk 109 mp+mdG++ll++i e +lp+i+++ ge + + + ++ Ga d+l Kp+ ++el++ TRIDC3AG055770.2 1 MPDMDGFKLLEHIGLEM-DLPVIMMSIDGETSRVMKGVQHGACDYLLKPVRMKELRN 56 9**********6654.8*********************************987 PP

Sequence ? help Back to Top
Protein Sequence Length: 519 aa Download sequence
MPDMDGFKLL EHIGLEMDLP VIMMSIDGET SRVMKGVQHG ACDYLLKPVR MKELRNIWQH 60 VYRKKMHEVK EIEGHDSCDD LQILRYGFEG FDEKGLFMTV DSDPTRKRKD MDHGDQDSSD 120 GATAKKARVV WSVDLHQKFV NAVNQIGFDK VGPKKILDLM NVPGLTRENV ASHLQKYRLY 180 LGRLQKQNEE RILGSGRQDF STKGPSSENL NLRSSFQEQP SNTSSGYPHA SQKIQGQSSL 240 SDSQLEETKR TVPLPAPDRS MNSVSSAAEP QNVAGVSPIG GVLSFKGLPV NQDRKPSETM 300 ILECQAWTGG VPAKQFMQYP KHNHARCDLL GDYACLPKPD LEHPTAPGHL FTPPPLISMS 360 CSTEMDARNF SDVKPALLDC IKSFSPALTC TADSVSVQIS DSVVTATNAA DRKFSSVEGL 420 PSTKDCYFGQ TSNQGSWLRS QEEPSIICGA DFASLPEDLP GYPLQGGVSF ENVGLSSIDL 480 FHYNDAMILS GLQSNWYDDQ DHFSSETTDY PLMDGCLFA

Sequence ? help Back to Top

Protein Sequence Length: 519 aa Download sequence

MPDMDGFKLL EHIGLEMDLP VIMMSIDGET SRVMKGVQHG ACDYLLKPVR MKELRNIWQH  60
VYRKKMHEVK EIEGHDSCDD LQILRYGFEG FDEKGLFMTV DSDPTRKRKD MDHGDQDSSD  120
GATAKKARVV WSVDLHQKFV NAVNQIGFDK VGPKKILDLM NVPGLTRENV ASHLQKYRLY  180
LGRLQKQNEE RILGSGRQDF STKGPSSENL NLRSSFQEQP SNTSSGYPHA SQKIQGQSSL  240
SDSQLEETKR TVPLPAPDRS MNSVSSAAEP QNVAGVSPIG GVLSFKGLPV NQDRKPSETM  300
ILECQAWTGG VPAKQFMQYP KHNHARCDLL GDYACLPKPD LEHPTAPGHL FTPPPLISMS  360
CSTEMDARNF SDVKPALLDC IKSFSPALTC TADSVSVQIS DSVVTATNAA DRKFSSVEGL  420
PSTKDCYFGQ TSNQGSWLRS QEEPSIICGA DFASLPEDLP GYPLQGGVSF ENVGLSSIDL  480
FHYNDAMILS GLQSNWYDDQ DHFSSETTDY PLMDGCLFA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G67710.1	2e-75	ARR-B family protein

Link Out ? help Back to Top
Ensembl	TRIDC3AG055770.2