PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3AG055870.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family GRAS
Protein Properties Length: 517aa    MW: 55927.7 Da    PI: 6.4552
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3AG055870.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS3466e-1061445161374
              GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykal.ppsetsekn..sseelaalklfsevsPi 90 
                       lv+lL++cAeav+ +d ++a alL +l+  a  +g+++qR+a++f+ +La rla   +        + + ++++     +  al + +e++P+
  TRIDC3AG055870.1 144 LVQLLVACAEAVACRDRAQAAALLRELQVGAPVHGTAFQRVASCFVLGLADRLALAHPPALGPAsMAFSVPRSSclDGARGEALAVAYELCPY 236
                       689***************************************************96665554431333333333456677788888******* PP

              GRAS  91 lkfshltaNqaIleavegeervHiiDfdisqGl....QWpaLlqaLasRpegpp.slRiTgvgspesgskeeleetgerLakfAeelgvpfef 178
                       l+f+h++aN  Ilea++ge+ vH++D+++++Gl    QW aLl+ La+R++g+p ++R+Tgvg+    + ++++++g+ ++ +Aeelg+ +ef
  TRIDC3AG055870.1 237 LRFAHFVANASILEAFDGESNVHVVDLGMTMGLnrghQWRALLDGLATRAGGKPaRVRVTGVGA----RVDTMRAVGREIEAYAEELGMCLEF 325
                       ***************************9865433333*************77666*********....9************************ PP

              GRAS 179 nvlvakrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsl 271
                       ++ v ++le+l++++L ++ +Ea+a+n+vl+lh +++es    +   +vL+++++lsPk +v+veq+a hn++ Fl rf+eal+yy+alfd+l
  TRIDC3AG055870.1 326 RA-VDRTLESLHVDDLCIDAHEAVAINSVLELHCVVKESRGALN---SVLQTIRKLSPKAFVLVEQDAGHNGPFFLGRFMEALHYYAALFDAL 414
                       **.799******************************88877777...8********************************************* PP

              GRAS 272 eaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveeesgslvlgWk 363
                       +a lpr +  r+ vE++  g ei+nvv cega+r+erhe++ +Wr+r+++aGF+++p++    ++a+  l++ + + gy+v ee+g+lvlgWk
  TRIDC3AG055870.1 415 DAALPRYDARRARVEQFHYGAEIRNVVGCEGAARVERHERADQWRRRMSRAGFQSLPIKMA--AKAREWLEEKAgGSGYTVAEEKGCLVLGWK 505
                       *********************************************************9754..455666665555****************** PP

              GRAS 364 drpLvsvSaWr 374
                       ++p++++S+W+
  TRIDC3AG055870.1 506 GKPVIAASCWK 516
                       **********8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 517 aa     Download sequence    
MVGMARNPFP TSWQTQEGAS ICTNQELDYE HPHYLGIEEV ALDGVELELG PRAPKATKVD  60
YLSSPYNASW PPAQADFESS RVRKTKQFRD VLETCKQKVE AMEALEHSPP VSGGGFEEQA  120
GEAVVAVGDV GGGGGGSGAD GMRLVQLLVA CAEAVACRDR AQAAALLREL QVGAPVHGTA  180
FQRVASCFVL GLADRLALAH PPALGPASMA FSVPRSSCLD GARGEALAVA YELCPYLRFA  240
HFVANASILE AFDGESNVHV VDLGMTMGLN RGHQWRALLD GLATRAGGKP ARVRVTGVGA  300
RVDTMRAVGR EIEAYAEELG MCLEFRAVDR TLESLHVDDL CIDAHEAVAI NSVLELHCVV  360
KESRGALNSV LQTIRKLSPK AFVLVEQDAG HNGPFFLGRF MEALHYYAAL FDALDAALPR  420
YDARRARVEQ FHYGAEIRNV VGCEGAARVE RHERADQWRR RMSRAGFQSL PIKMAAKARE  480
WLEEKAGGSG YTVAEEKGCL VLGWKGKPVI AASCWKC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G14920.13e-57GRAS family protein