PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3AG055890.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ERF
Protein Properties Length: 69aa    MW: 7839.75 Da    PI: 9.1
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3AG055890.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP229.22.3e-09757256
               AP2  2 gykGVrwdkkrgrWvAeIrdpseng..krkrfslgkfgtaeeAakaaiaarkklege 56
                      +y+GV++++ +g+W      p++      k+ + g+f  aeeAa  ++ +++++ ge
  TRIDC3AG055890.1  7 RYRGVFQRH-WGKWG-----PRSKTptWGKKQWFGTFNIAEEAACDYDVMALAYQGE 57
                      69****999.*****.....65533444599999*******************9986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 69 aa     Download sequence    
EMAYNGRYRG VFQRHWGKWG PRSKTPTWGK KQWFGTFNIA EEAACDYDVM ALAYQGEGPN  60
STFPTMSGA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G15360.16e-14ERF family protein