PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3AG057280.5
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family LBD
Protein Properties Length: 206aa    MW: 22368.5 Da    PI: 10.5812
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3AG057280.5genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260138.22.9e-4334132199
            DUF260   1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkae 93 
                       +CaaCk+lrrkC++dCv+apyfp ++p+kf  vh++FGasnv+kll++l++ +reda++sl+yeA++r+rdPvyG+v+vi+ lq++l+ql+++
  TRIDC3AG057280.5  34 PCAACKFLRRKCQPDCVFAPYFPPDNPQKFVHVHRVFGASNVTKLLNELHPYQREDAVNSLAYEADMRLRDPVYGCVAVISILQRNLRQLQQD 126
                       7******************************************************************************************** PP

            DUF260  94 lallke 99 
                       la++k 
  TRIDC3AG057280.5 127 LARAKY 132
                       *99876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 206 aa     Download sequence    
SASSLPAPGG SVITLAASSA GGNGAGGVCG TGSPCAACKF LRRKCQPDCV FAPYFPPDNP  60
QKFVHVHRVF GASNVTKLLN ELHPYQREDA VNSLAYEADM RLRDPVYGCV AVISILQRNL  120
RQLQQDLARA KYELSKYQTV ILVSVGGGAE RVAVDGGVHR QRGAERRGEL HQRWALRGAR  180
LRRRGHGLRA RPSVRCRADA VQELRG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G65620.37e-56LBD family protein