PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC3AG057440.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

NAC

Protein Properties

Length: 404aa MW: 43606.8 Da PI: 9.4059

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC3AG057440.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	159.9	1e-49	32	157	2	128
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevls 94 +pGfrFhPt+eel+ +yL++kvegk++++ e i+ +d+y+++Pw+Lp+ ++ +ekew+f+++rd+ky++g+r+nr+t+sgyWkatg d+ + + TRIDC3AG057440.1 32 MPGFRFHPTEEELIEFYLRRKVEGKRFNV-ELITFLDLYRYDPWELPALAAIGEKEWFFYVPRDRKYRNGDRPNRVTASGYWKATGADRMIRA 123 79*************************.89***********8778899*********************************** PP NAM 95 kkgelvglkktLvfykgrapkgektdWvmheyrl 128 ++++ +glkktLvfy+g+apkg++++W+m+eyrl TRIDC3AG057440.1 124 ENNRSIGLKKTLVFYSGKAPKGVRSSWIMNEYRL 157 ******************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 404 aa Download sequence
GHGAAAAAAG GAGVGSIKEG GGRDAHEDDL VMPGFRFHPT EEELIEFYLR RKVEGKRFNV 60 ELITFLDLYR YDPWELPALA AIGEKEWFFY VPRDRKYRNG DRPNRVTASG YWKATGADRM 120 IRAENNRSIG LKKTLVFYSG KAPKGVRSSW IMNEYRLPTA DTDRYHKTEI SLCRVYKRTG 180 IDDGRGHPSS ARSTMPSRRG AEARQDNRQG SSSTSTPTPP PTPSKLQLLQ AGECTSPPAP 240 MTDHAQTHRP AAPRQQLAAA VKPSGGSLGY LQSTAAAGEH HQQEGAAALL YQQYSKSTNT 300 FASTYSLLNL VNAASMGVAS AAAIDELSTL VGHGATQLPS YHSPASSGGH HDHFVVPLPA 360 PPSQPITPLG TLPMSLAAIS DKIWDWNPIP DAAAGRDYGG AGFK

Sequence ? help Back to Top

Protein Sequence Length: 404 aa Download sequence

GHGAAAAAAG GAGVGSIKEG GGRDAHEDDL VMPGFRFHPT EEELIEFYLR RKVEGKRFNV  60
ELITFLDLYR YDPWELPALA AIGEKEWFFY VPRDRKYRNG DRPNRVTASG YWKATGADRM  120
IRAENNRSIG LKKTLVFYSG KAPKGVRSSW IMNEYRLPTA DTDRYHKTEI SLCRVYKRTG  180
IDDGRGHPSS ARSTMPSRRG AEARQDNRQG SSSTSTPTPP PTPSKLQLLQ AGECTSPPAP  240
MTDHAQTHRP AAPRQQLAAA VKPSGGSLGY LQSTAAAGEH HQQEGAAALL YQQYSKSTNT  300
FASTYSLLNL VNAASMGVAS AAAIDELSTL VGHGATQLPS YHSPASSGGH HDHFVVPLPA  360
PPSQPITPLG TLPMSLAAIS DKIWDWNPIP DAAAGRDYGG AGFK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G02450.2	1e-101	NAC family protein

Link Out ? help Back to Top
Ensembl	TRIDC3AG057440.1