PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3AG057660.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family HSF
Protein Properties Length: 426aa    MW: 47250.8 Da    PI: 4.918
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3AG057660.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind104.49.2e-33711612101
                       HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXX CS
      HSF_DNA-bind   2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkell 94 
                       Fl+k+y++++d+++++++sws+ +ns+vv+d ++f+  +Lp++Fkhsnf+ FvRQLn+YgF+kv+ ++         weF+++ F +g+++ll
  TRIDC3AG057660.1  71 FLTKTYDMVDDRSTDNVVSWSAGNNSLVVWDLHRFSAVLLPRHFKHSNFSTFVRQLNTYGFRKVDPDR---------WEFANEGFLRGQRHLL 154
                       9****************************************************************999.........**************** PP

                       XXXXXXX CS
      HSF_DNA-bind  95 ekikrkk 101
                       ++i+r++
  TRIDC3AG057660.1 155 KNIRRRR 161
                       *****97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 426 aa     Download sequence    
FSSRAREQRY GEEGFGVVAW LGGFLGFGCM DPMPSLVKVE EEDGHGTGDS PGATAAPRPL  60
EGLRDAKPSL FLTKTYDMVD DRSTDNVVSW SAGNNSLVVW DLHRFSAVLL PRHFKHSNFS  120
TFVRQLNTYG FRKVDPDRWE FANEGFLRGQ RHLLKNIRRR RPPANTAPNQ QSLGSYLEVG  180
HFGNHTDTDQ LKRDKQLLMA EVVKLRQEQQ SMKTHLKGME ERLHGTERKQ QQMTAFLARV  240
FRNPELLKQL VSLNGVRKEL HDAMSKKRRR SIDQGPEADD MGASGSLEQD SPVLSDPHES  300
VELLGEVSVE LLADGVPSEL ESSVALLADG IPPDLEGAAE LLVDVIPSDI NDSGVDTNGV  360
KPQDFGLGTC EVQQNGAQGV LHDDFWEELM SRALSAEDDN PVNVDGMDVM SEKTDHLVPN  420
SPTRAT
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1148161RGQRHLLKNIRRRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G22830.11e-86HSF family protein