PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3AG058080.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family GRAS
Protein Properties Length: 552aa    MW: 61322.9 Da    PI: 4.5015
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3AG058080.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS423.32e-1291835522374
              GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfs 94 
                       ++lL++cA+a+++ +  +aqa+++ l++++s +gdp +R+aay++e+Laar++ s++++ykal++++ +   +  +l+a+++++e++P+++f+
  TRIDC3AG058080.1 183 KQLLFDCATALAEYNVDEAQAIITDLRQMVSIQGDPSHRIAAYLVEGLAARIVASGTGIYKALTCKDPP---TLYQLSAMQILFEICPCYRFG 272
                       589*****************************************************************9...89999**************** PP

              GRAS  95 hltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakr 185
                       +++aN aIlea +geer+HiiDfdi+qG Q+++L+q + + +++p +lRiTgv+++e++      l+ +g+rL+k+Ae +g++fef++ v  +
  TRIDC3AG058080.1 273 FMAANYAILEACKGEERMHIIDFDINQGSQYITLMQFMKDDANKPRHLRITGVDDHETVqrTVGGLKVIGQRLEKLAEDCGISFEFRA-VGAD 364
                       *******************************************************9988778889***********************.7999 PP

              GRAS 186 ledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpre 278
                       + d+++ +L+++pgEal+Vn+++qlh+l+desvs+ +erd++L++vk+l+Pk+v++veq+a++n+++F +rf e  +yysalfdsl+a+lpre
  TRIDC3AG058080.1 365 IGDVTPAMLDCRPGEALVVNFAFQLHHLPDESVSIMNERDQLLRMVKGLQPKLVTLVEQDANTNTAPFQTRFREVYDYYSALFDSLDATLPRE 457
                       ********************************************************************************************* PP

              GRAS 279 seerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvS 371
                       s +r++vEr++l+reivn++aceg +r+er e ++kWr+r+++aGF p p+s+++   +++ll+ + ++ y+ ee++g l +gW +++L+++S
  TRIDC3AG058080.1 458 SPDRMNVERQCLAREIVNILACEGPDRVERYEVAGKWRARMTMAGFAPCPFSSNVIGGIRSLLSSYCDR-YKFEEDHGGLHFGWGEKTLIVAS 549
                       *******************************************************************66.*********************** PP

              GRAS 372 aWr 374
                       aW+
  TRIDC3AG058080.1 550 AWQ 552
                       **6 PP
Sequence ? help Back to Top
Protein Sequence    Length: 552 aa     Download sequence    
MSFVGRVDPS TTYADNIYVH KFGAPNSNFA ARRFGSDTQL FRYGPEPFNS EDYGHMGFPE  60
APSAAFQSSF YNQQASLTPC SDAAKDSPVC SNISQQNSQS ISDNQSSGLE VEFDDEIRLK  120
LQELEHALLD DGDDILFEVS QAGCISDEWA DPMKDVLLAN SPKESESSIS CAGSNSGEAR  180
TPKQLLFDCA TALAEYNVDE AQAIITDLRQ MVSIQGDPSH RIAAYLVEGL AARIVASGTG  240
IYKALTCKDP PTLYQLSAMQ ILFEICPCYR FGFMAANYAI LEACKGEERM HIIDFDINQG  300
SQYITLMQFM KDDANKPRHL RITGVDDHET VQRTVGGLKV IGQRLEKLAE DCGISFEFRA  360
VGADIGDVTP AMLDCRPGEA LVVNFAFQLH HLPDESVSIM NERDQLLRMV KGLQPKLVTL  420
VEQDANTNTA PFQTRFREVY DYYSALFDSL DATLPRESPD RMNVERQCLA REIVNILACE  480
GPDRVERYEV AGKWRARMTM AGFAPCPFSS NVIGGIRSLL SSYCDRYKFE EDHGGLHFGW  540
GEKTLIVASA WQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G21450.10.0GRAS family protein