PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC3AG058620.5

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

C2H2

Protein Properties

Length: 1002aa MW: 110828 Da PI: 8.8411

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC3AG058620.5	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	10.8	0.0015	884	906	1	21
EEET..TTTEEESSHHHHHHHHH CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHir 21 y+C+ C++sF +k +L H r TRIDC3AG058620.5 884 YTCTidGCSMSFDTKKELSLHER 906 99*******************98 PP
2	zf-C2H2	13	0.00031	909	931	3	23
ET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 3 Cp..dCgksFsrksnLkrHirtH 23 Cp Cgk F ++ +L +H ++H TRIDC3AG058620.5 909 CPveGCGKKFFTHKYLLQHRKVH 931 9999*****************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 1002 aa Download sequence
TLGQKTTLLS PELLVGSGVP CCRLVQNAGE FVVTFPGSYH CGFSHGGFNC GEASNIATPE 60 WWRVAKEAAV RRASINQPPM LSHYQLLYEL ALSMCIRDPS IGTMEPRSSR LKEKKKGEGG 120 QLVKKLFVQN AIQDNELLSC LLNDGSSCII LPINAHDGPV LSALRSRSQL IPKSKLSRCT 180 HDSHNAEGDK EDVISAAGLL DQGLLSCVSC GILSFSCVAV IKPRECASKY FMSSDYNSIN 240 DQLVGSGGSH LANAAGSEGT NGGILRPSFE PYANDAGPVT RNSAPDLLAS AYGNQPDTDE 300 DNRNKKIKVS HDSSELDGTK ILSSSIKWQQ RPSSQSSRCI GGSGISNGPR GVRTRNKYQL 360 KMALSQGFQL KNNYWTMEQK VQPEPSRSKE TVKEPLDASG ADNDARCNSA AISVGDPRIS 420 TTTMDNLNKP IVKIDKDSSR MHVFCLEHAV EVEKQLQAIG GAHVILLCRP EYLKIEAEAR 480 SLAAEMEVEH GWKDIHFREA NMEDRKMIEE LLQDEESIPT SSDWAVKLGT NLYYSANLAK 540 SPLHNKQIPY NRVIYRAFGC SSPDNSPVKR ENCEGSQDRQ KKVVLAGRWC GKAWMSNQVH 600 PFLAQRIESS EAKEADKSSG VQASKRNSGT ITDVPKSSKK RGNMAVEVTI DTKRPRLAEG 660 HSSKPLKGIA DVSHPSPAAV VPRVSSRIAD RANRLKSDMT EEDDGHACRP KPKATSHSRT 720 RPPKKIEVEA KKQMNMSKGD SKMMAPTAAK DDEEHPSATK GGPSVGPATK LEFSQRKHRT 780 RTKTMKLLKK ATGEERTPRD HPMHVEGYTC SIEGCSMSFD TRNELSLHEL DICPVKGCGK 840 KFFTHKFLLQ HHKVHTETTK QLKKATGEER APTPRDHPMR VEGYTCTIDG CSMSFDTKKE 900 LSLHERDICP VEGCGKKFFT HKYLLQHRKV HTDDRPLKCP WEGCDVAFKW AWARTEHLRV 960 HTGDRPYVCC EPGCAETFRF VSDSSRHKRE TGHSTKQTKT KT

Sequence ? help Back to Top

Protein Sequence Length: 1002 aa Download sequence

TLGQKTTLLS PELLVGSGVP CCRLVQNAGE FVVTFPGSYH CGFSHGGFNC GEASNIATPE  60
WWRVAKEAAV RRASINQPPM LSHYQLLYEL ALSMCIRDPS IGTMEPRSSR LKEKKKGEGG  120
QLVKKLFVQN AIQDNELLSC LLNDGSSCII LPINAHDGPV LSALRSRSQL IPKSKLSRCT  180
HDSHNAEGDK EDVISAAGLL DQGLLSCVSC GILSFSCVAV IKPRECASKY FMSSDYNSIN  240
DQLVGSGGSH LANAAGSEGT NGGILRPSFE PYANDAGPVT RNSAPDLLAS AYGNQPDTDE  300
DNRNKKIKVS HDSSELDGTK ILSSSIKWQQ RPSSQSSRCI GGSGISNGPR GVRTRNKYQL  360
KMALSQGFQL KNNYWTMEQK VQPEPSRSKE TVKEPLDASG ADNDARCNSA AISVGDPRIS  420
TTTMDNLNKP IVKIDKDSSR MHVFCLEHAV EVEKQLQAIG GAHVILLCRP EYLKIEAEAR  480
SLAAEMEVEH GWKDIHFREA NMEDRKMIEE LLQDEESIPT SSDWAVKLGT NLYYSANLAK  540
SPLHNKQIPY NRVIYRAFGC SSPDNSPVKR ENCEGSQDRQ KKVVLAGRWC GKAWMSNQVH  600
PFLAQRIESS EAKEADKSSG VQASKRNSGT ITDVPKSSKK RGNMAVEVTI DTKRPRLAEG  660
HSSKPLKGIA DVSHPSPAAV VPRVSSRIAD RANRLKSDMT EEDDGHACRP KPKATSHSRT  720
RPPKKIEVEA KKQMNMSKGD SKMMAPTAAK DDEEHPSATK GGPSVGPATK LEFSQRKHRT  780
RTKTMKLLKK ATGEERTPRD HPMHVEGYTC SIEGCSMSFD TRNELSLHEL DICPVKGCGK  840
KFFTHKFLLQ HHKVHTETTK QLKKATGEER APTPRDHPMR VEGYTCTIDG CSMSFDTKKE  900
LSLHERDICP VEGCGKKFFT HKYLLQHRKV HTDDRPLKCP WEGCDVAFKW AWARTEHLRV  960
HTGDRPYVCC EPGCAETFRF VSDSSRHKRE TGHSTKQTKT KT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G48430.1	4e-67	C2H2 family protein

Link Out ? help Back to Top
Ensembl	TRIDC3AG058620.5