PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3AG059000.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family C2H2
Protein Properties Length: 368aa    MW: 38962.9 Da    PI: 4.2831
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3AG059000.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H215.64.6e-05344367123
                       EEETTTTEEESSHHHHHHHHHH.T CS
           zf-C2H2   1 ykCpdCgksFsrksnLkrHirt.H 23 
                       + C+ C+++F + s L++H +  H
  TRIDC3AG059000.1 344 HACKSCSRTFGSASALQSHEKAkH 367
                       67*****************99877 PP
Sequence ? help Back to Top
Protein Sequence    Length: 368 aa     Download sequence    
MKFWGVEVKP GQTVYCDPGE GRVVHLTQVA LGETEKGSVG ILVSAKIGDQ KGAIGTLSAE  60
NHPQIPCDLI FEKQFELSHS SKTASVFACG YKIFVPICES DSSEFDSSEF DSSEDEVETV  120
NNQVTNPIVG NVAKPPTAKG DKKVADNHGS GEDDSDFSSS DSDDYDDDGY SSLDTDSEED  180
GASSEEMDTS SKEEGKDSPK PEDGEKAVAE TAFKTPASDD TSSKEGSSDE ENKNTPEPED  240
GEKMVAAETA LETPGSDDTS NKEDTSDQED KNTPKPEVGT KRTAETALET PAPDKKAKIE  300
TPSGQGTDDK KTVHVATPHP AKQADKAPGN SKPNLKSKYV GGAHACKSCS RTFGSASALQ  360
SHEKAKHA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G44750.21e-24C2H2 family protein