PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC3AG059180.5

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

Protein Properties

Length: 622aa MW: 66204.9 Da PI: 6.957

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC3AG059180.5	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	58.4	1.3e-18	516	611	2	94
EEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEE.TTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.S CS B3 2 fkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltled.esgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgr.s 88 +kvl++sdv+++gr+vlpkk ae+h ++k+ ++ + +ed ++++W++++++ ++ks++y+l+ ++ +Fv++n+L+egDf+v++ ++ + TRIDC3AG059180.5 516 QKVLKQSDVGTLGRIVLPKKEAETHlpELKTGDGISIPIEDiGTSQVWSMRYRFwpNNKSRMYLLE-NTGDFVRSNELQEGDFIVLY--SDvK 605 79***********************99999*****7777***99777777777777.******************..4557 PP EE..EE CS B3 89 efelvv 94 ++++v+ TRIDC3AG059180.5 606 SGKYVI 611 777665 PP

Sequence ? help Back to Top
Protein Sequence Length: 622 aa Download sequence
MDASAGSSPP RHSQGDAPRR GGPHRGKGPA VEIRQGEDDF MFAHDTFPAL PDFPCLSSPS 60 SSTFSSSSSS NSSSAFTRAV GAGGRGGESA RGEPSEPAAA GDGMDDLSDI DHLLDFASIN 120 EDVPWDDEPL FPDVGMMLED VISEQQQLQP PAGHGTAGRT ASHAAAGGGE DAFMGGGGTG 180 SAADDLPRFF MEWLKNNRDC ISAEDLRSIR LRRSTIEAAA ARLGGGRQGT MQLLKLILTW 240 VQNHHLQKKR PRVGAMDQEA LPAGGQLPSP GANPGYEFPA ETGAAAATSW IPYQAFSPTG 300 SYGGEAIYPF QQGCSTSSVG VSSQPFSPPA APDMHAGAWP LQYAAFVPAG ATSAGTQTYP 360 MPPPGAVPQP FAAPGFAGQF PQRMEPAATR EARKKRMARQ RRLSCLQQQR SQQLNLSQIQ 420 TGGFPQEPSP RAAHSAPVTP PSSGWGGLWT QQAVQSQPHG QLMVQVPNPL STKSNSSRQK 480 QQKPSPDAAA RPCAQGARTP AAAPAAGDKN LRFLLQKVLK QSDVGTLGRI VLPKKEAETH 540 LPELKTGDGI SIPIEDIGTS QVWSMRYRFW PNNKSRMYLL ENTGDFVRSN ELQEGDFIVL 600 YSDVKSGKYV INNIAFILQN IT

Sequence ? help Back to Top

Protein Sequence Length: 622 aa Download sequence

MDASAGSSPP RHSQGDAPRR GGPHRGKGPA VEIRQGEDDF MFAHDTFPAL PDFPCLSSPS  60
SSTFSSSSSS NSSSAFTRAV GAGGRGGESA RGEPSEPAAA GDGMDDLSDI DHLLDFASIN  120
EDVPWDDEPL FPDVGMMLED VISEQQQLQP PAGHGTAGRT ASHAAAGGGE DAFMGGGGTG  180
SAADDLPRFF MEWLKNNRDC ISAEDLRSIR LRRSTIEAAA ARLGGGRQGT MQLLKLILTW  240
VQNHHLQKKR PRVGAMDQEA LPAGGQLPSP GANPGYEFPA ETGAAAATSW IPYQAFSPTG  300
SYGGEAIYPF QQGCSTSSVG VSSQPFSPPA APDMHAGAWP LQYAAFVPAG ATSAGTQTYP  360
MPPPGAVPQP FAAPGFAGQF PQRMEPAATR EARKKRMARQ RRLSCLQQQR SQQLNLSQIQ  420
TGGFPQEPSP RAAHSAPVTP PSSGWGGLWT QQAVQSQPHG QLMVQVPNPL STKSNSSRQK  480
QQKPSPDAAA RPCAQGARTP AAAPAAGDKN LRFLLQKVLK QSDVGTLGRI VLPKKEAETH  540
LPELKTGDGI SIPIEDIGTS QVWSMRYRFW PNNKSRMYLL ENTGDFVRSN ELQEGDFIVL  600
YSDVKSGKYV INNIAFILQN IT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G24650.1	5e-55	B3 family protein

Link Out ? help Back to Top
Ensembl	TRIDC3AG059180.5