PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3AG059320.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB
Protein Properties Length: 287aa    MW: 31888.6 Da    PI: 6.9016
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3AG059320.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding507e-161966148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
   Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                      rg+WT eEd ll+  ++++G g+W+  a+  g++Rt+k+c++rw++yl
  TRIDC3AG059320.1 19 RGPWTMEEDALLAGHIAKHGEGRWNELASAAGLRRTGKSCRLRWLNYL 66
                      89********************************************97 PP
2Myb_DNA-binding52.41.2e-1672115146
                       TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
   Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                       rg +T++E++l+++++ ++G++ W++Iar+m+ gRt++++k++w++
  TRIDC3AG059320.1  72 RGDFTPQEQLLILELHFRWGKR-WSRIAREMP-GRTDNEIKNYWRT 115
                       899*******************.*********.***********96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 287 aa     Download sequence    
WPAAAATTGG EQEATDLRRG PWTMEEDALL AGHIAKHGEG RWNELASAAG LRRTGKSCRL  60
RWLNYLRPDV RRGDFTPQEQ LLILELHFRW GKRWSRIARE MPGRTDNEIK NYWRTRVQKH  120
AKQLKCDVDS RQFRDVMRHL WMPRLLERIQ AAAAATPAPS LEHAASPVHP LSVAPACRGG  180
IGMCHSPETT TVTTSSTAGS SVSLEVHFPS NQLVLTAGST TNWSGSGSDQ CGSASARSDD  240
MLDGSWSELL ARACDDGADS VVFPHFELGE SSDDKWSLED IWSQHQY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G48000.15e-74MYB family protein