PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3AG059790.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family FAR1
Protein Properties Length: 97aa    MW: 11545.1 Da    PI: 8.6145
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3AG059790.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR152.71.4e-162592165
              FAR1  1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk...tekerrtraetrtgCkak 65
                      +fYn+YA e GFsvrk + +  + n++i+ r++vCs+eg ree++ k   ++++r++++ tr+gCk k
  TRIDC3AG059790.1 25 EFYNKYALEKGFSVRKGYVEWDEANEKIILRKLVCSREGCREEKHMKrkrEDRKRKPQNITRVGCKSK 92
                      6*****************************************999887778889999*********87 PP
Sequence ? help Back to Top
Protein Sequence    Length: 97 aa     Download sequence    
ISAECMAEYD DIVSRMFDSE EEGFEFYNKY ALEKGFSVRK GYVEWDEANE KIILRKLVCS  60
REGCREEKHM KRKREDRKRK PQNITRVGCK SKFSGGY
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
17380KREDRKRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.15e-11FAR1 family protein