PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3AG061260.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family SBP
Protein Properties Length: 195aa    MW: 21307.2 Da    PI: 10.7147
Description SBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3AG061260.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SBP1352.4e-4284160278
                       -SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS
               SBP   2 CqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 
                       C vegC+adls+++eyhrrhkvCe+hsk+pvv+v+g++qrfCqqCsrfh l efDe krsCr+rL++hn+rrrk+q+
  TRIDC3AG061260.1  84 CSVEGCTADLSRCREYHRRHKVCEAHSKTPVVAVAGQQQRFCQQCSRFHLLGEFDEVKRSCRKRLDGHNRRRRKPQP 160
                       **************************************************************************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 195 aa     Download sequence    
MDSWEHKMPS WDLSTVVAPS GGGGGGGGGA LDLKLGAPTS WRPVPAAAVA SVQQQQQQPP  60
PPSAAPAPAK RARAGQGQQT VPPCSVEGCT ADLSRCREYH RRHKVCEAHS KTPVVAVAGQ  120
QQRFCQQCSR FHLLGEFDEV KRSCRKRLDG HNRRRRKPQP DPLNPAGLFA NHHAGKLRFL  180
ALPFCRKQEK NVIHH
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1141158KRSCRKRLDGHNRRRRKP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G50670.18e-33SBP family protein