PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3AG061260.3
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family SBP
Protein Properties Length: 121aa    MW: 12510.1 Da    PI: 10.2567
Description SBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3AG061260.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SBP76.54.4e-2472119249
                       -SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSE CS
               SBP   2 CqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrf 49 
                       C vegC+adls+++eyhrrhkvCe+hsk+pvv+v+g++qrfCqqCsr+
  TRIDC3AG061260.3  72 CSVEGCTADLSRCREYHRRHKVCEAHSKTPVVAVAGQQQRFCQQCSRY 119
                       ***********************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 121 aa     Download sequence    
LSTVVAPSGG GGGGGGGALD LKLGAPTSWR PVPAAAVASV QQQQQQPPPP SAAPAPAKRA  60
RAGQGQQTVP PCSVEGCTAD LSRCREYHRR HKVCEAHSKT PVVAVAGQQQ RFCQQCSRYT  120
R
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G50670.12e-22SBP family protein