PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3AG061280.6
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family M-type_MADS
Protein Properties Length: 143aa    MW: 15647.3 Da    PI: 5.0098
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3AG061280.6genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF69.14.1e-222401351
                      HHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
            SRF-TF 13 fskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                      fskRr+g++KKA+ELS LCdaeva+++fs+ gklyey+s
  TRIDC3AG061280.6  2 FSKRRAGLFKKAFELSLLCDAEVALLVFSPAGKLYEYAS 40
                      9************************************86 PP
Sequence ? help Back to Top
Protein Sequence    Length: 143 aa     Download sequence    
RFSKRRAGLF KKAFELSLLC DAEVALLVFS PAGKLYEYAS SSIEGTYDRY QQFAVPGRNL  60
IQEDATDEDP SNMQSRLSEI AAWSLDNNAD NSDASSLEKL EKLLKDALRI TESKKTLVKQ  120
NSGGGTSGES SYGPTGQENG RKA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G45660.14e-22MIKC_MADS family protein