PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC3AG061340.6

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

CAMTA

Protein Properties

Length: 733aa MW: 82246.7 Da PI: 6.3195

Description

CAMTA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC3AG061340.6	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CG-1	152.1	1.3e-47	16	131	3	117
CG-1 3 ke.kkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptf 94 +e k+rwlk++e+++iL+n e + +++ +++rp+ gs++L+nr++ r+fr+DGy w+kkk+gk+ +E+he LKv++v++l+cyYa++e+np f TRIDC3AG061340.6 16 REvKTRWLKPREVLDILQNCELFGIQNRTPQRPPGGSWFLFNRRVHRFFRNDGYVWQKKKNGKSGNEAHEYLKVDNVKALNCYYARAENNPRF 108 56699************************************************************************************** PP CG-1 95 qrrcywlLeeelekivlvhylev 117 rr+yw+Le ++e+ivlvhy++v TRIDC3AG061340.6 109 MRRIYWMLEPAYEHIVLVHYRDV 131 ******************987 PP

Sequence ? help Back to Top
Protein Sequence Length: 733 aa Download sequence
MQQQQRQGHD ILNLQREVKT RWLKPREVLD ILQNCELFGI QNRTPQRPPG GSWFLFNRRV 60 HRFFRNDGYV WQKKKNGKSG NEAHEYLKVD NVKALNCYYA RAENNPRFMR RIYWMLEPAY 120 EHIVLVHYRD VLEGSISVSV LNGSPTSNQN GSASRADAHS SPGLTSEIVA PLLNSCSPGS 180 AEEVSSQIPT INNETNDISL FDWRRTLEMQ LSLENKERHD VNTDEVLPNH DPIPAHGIQN 240 EELDACINLA DVFDLGFSED NHAEGSHPYP DPIDVLKYSE TWLEDDQLKS ILHSAPVTID 300 ENQWFHLHEV SPEWAFCSES AKVVIVGDFP CNLSNSSWVL FGDVKVPAVV VQQGVIRCYT 360 PPYLGAGKVR MCMLDENGKP CTEDREFEFV EKPTNTMING NGKPCSEARE FEFQQRPTKS 420 DNGLLLLINY VQMLFDSHGC ELFSKFRLPL PNARSGFPVN PSEIIGRTCE QLDHENAVNC 480 IMEVMLNNKF QDWLSSKFEQ NSEGEYLLPR QYHGVIHTIA ALGYDWALKP LLSNGVPINY 540 RDANGWTALH WAARFGREQM VAVLVVAGAA VGALSDPTAE DPAAKTPASI ASAYGFIGIS 600 AFLSEAQLTS TLDSLESKEN GKPVDHNGGV STSNAVDRVS DKCAHVDGGT DDQLALKDSL 660 GAIRNAVQAA GRIQATFRVF SLKKKKQKAL QNGDSSASPS MLERATLSIQ KNFRCWKKRK 720 EYQKIRKNVI KIQ

Sequence ? help Back to Top

Protein Sequence Length: 733 aa Download sequence

MQQQQRQGHD ILNLQREVKT RWLKPREVLD ILQNCELFGI QNRTPQRPPG GSWFLFNRRV  60
HRFFRNDGYV WQKKKNGKSG NEAHEYLKVD NVKALNCYYA RAENNPRFMR RIYWMLEPAY  120
EHIVLVHYRD VLEGSISVSV LNGSPTSNQN GSASRADAHS SPGLTSEIVA PLLNSCSPGS  180
AEEVSSQIPT INNETNDISL FDWRRTLEMQ LSLENKERHD VNTDEVLPNH DPIPAHGIQN  240
EELDACINLA DVFDLGFSED NHAEGSHPYP DPIDVLKYSE TWLEDDQLKS ILHSAPVTID  300
ENQWFHLHEV SPEWAFCSES AKVVIVGDFP CNLSNSSWVL FGDVKVPAVV VQQGVIRCYT  360
PPYLGAGKVR MCMLDENGKP CTEDREFEFV EKPTNTMING NGKPCSEARE FEFQQRPTKS  420
DNGLLLLINY VQMLFDSHGC ELFSKFRLPL PNARSGFPVN PSEIIGRTCE QLDHENAVNC  480
IMEVMLNNKF QDWLSSKFEQ NSEGEYLLPR QYHGVIHTIA ALGYDWALKP LLSNGVPINY  540
RDANGWTALH WAARFGREQM VAVLVVAGAA VGALSDPTAE DPAAKTPASI ASAYGFIGIS  600
AFLSEAQLTS TLDSLESKEN GKPVDHNGGV STSNAVDRVS DKCAHVDGGT DDQLALKDSL  660
GAIRNAVQAA GRIQATFRVF SLKKKKQKAL QNGDSSASPS MLERATLSIQ KNFRCWKKRK  720
EYQKIRKNVI KIQ

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	683	720	KKKKQKALQNGDSSASPSMLERATLSIQKNFRCWKKRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G16940.1	9e-71	CAMTA family protein

Link Out ? help Back to Top
Ensembl	TRIDC3AG061340.6