PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3AG061470.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family M-type_MADS
Protein Properties Length: 71aa    MW: 8275.72 Da    PI: 11.666
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3AG061470.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF78.25.8e-251059251
                      ---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
            SRF-TF  2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                      ri++ + rqv fskRr g++KKA+EL  LCd+ev++++fs+ g++yey+s
  TRIDC3AG061470.1 10 RIKDRTSRQVRFSKRRSGLFKKAFELALLCDTEVSLLVFSPAGRFYEYAS 59
                      8***********************************************86 PP
Sequence ? help Back to Top
Protein Sequence    Length: 71 aa     Download sequence    
ARRGRVELRR IKDRTSRQVR FSKRRSGLFK KAFELALLCD TEVSLLVFSP AGRFYEYASS  60
RCMMLPPPHS V
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G11880.12e-24MIKC_MADS family protein