PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3AG061490.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family M-type_MADS
Protein Properties Length: 164aa    MW: 18039.1 Da    PI: 9.7524
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3AG061490.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF86.61.4e-27857251
                      ---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
            SRF-TF  2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                      rie+ +nrqv fskRr g++KKA+ELS LCda+va+++fs+ gklyeyss
  TRIDC3AG061490.1  8 RIEDRTNRQVCFSKRRSGLFKKAFELSLLCDADVALLVFSPAGKLYEYSS 57
                      8***********************************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 164 aa     Download sequence    
RGRVELRRIE DRTNRQVCFS KRRSGLFKKA FELSLLCDAD VALLVFSPAG KLYEYSSSSI  60
EATYDRYQRF AGPGMNVNGG DARNKNDGDP SNIQSRLEDI ASWSLQNNAD DSDATKLEKL  120
EKLLTDALRN TKSKKMLAQL NSGASTSASA QNSNGPRGLE GGRT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G22950.13e-31MIKC_MADS family protein