PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3AG061500.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MIKC_MADS
Protein Properties Length: 167aa    MW: 18547.6 Da    PI: 10.2747
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3AG061500.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF81.55.6e-261160251
                      ---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
            SRF-TF  2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                      rie+ + rqv fskRr+g++KKA+EL vLCdaev++++fs+ g+lyey+s
  TRIDC3AG061500.2 11 RIEDRTSRQVRFSKRRAGLFKKAFELAVLCDAEVSLLVFSPAGRLYEYAS 60
                      8***********************************************86 PP
2K-box13.62.8e-061171404871
             K-box  48 lkeLqqLeqqLekslkkiRskKne 71 
                        +eL++Le+ L ++lk+ RskK+ 
  TRIDC3AG061500.2 117 ANELEKLEKLLTDALKNTRSKKML 140
                       68********************85 PP
Sequence ? help Back to Top
Protein Sequence    Length: 167 aa     Download sequence    
MARRGRVELR RIEDRTSRQV RFSKRRAGLF KKAFELAVLC DAEVSLLVFS PAGRLYEYAS  60
SSIEGTYDRY QAFARAGKDV NEPGASNNND GDPSNIQSRL KEITSWSLQN NADDSDANEL  120
EKLEKLLTDA LKNTRSKKML AQRNSGAGTS ASGENSGRPR GQKEGRT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G30260.16e-33MIKC_MADS family protein