PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC3AG061680.4

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

TCP

Protein Properties

Length: 270aa MW: 27948.5 Da PI: 8.6985

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC3AG061680.4	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	123.2	2.9e-38	78	152	3	77
TCP 3 gkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssaseceaes 77 +k+++++++hTkv+gR+RR+R++a+caar+F+L++eLG+++d++t++WLlqqa+pai ++tgt++++as+ ++++ TRIDC3AG061680.4 78 PKRSSNKDRHTKVDGRGRRIRMPALCAARIFQLTRELGHKSDGETVQWLLQQAEPAIVAATGTGTIPASALSSVA 152 6999***************************************************************96663222 PP

Sequence ? help Back to Top
Protein Sequence Length: 270 aa Download sequence
MDPKFPPPPP LNKAEPTSAP PQQQEQQPPQ HQQHLQIQVH QQQEDGGGGG GGGKEQQQQQ 60 VVVAAAAAGD RRVQALGPKR SSNKDRHTKV DGRGRRIRMP ALCAARIFQL TRELGHKSDG 120 ETVQWLLQQA EPAIVAATGT GTIPASALSS VAPSLPSPTS ALAGRPHHHH HMWGPPPASA 180 GFSQAGFMNS SGADGGGIGG LMQRIGLPAG IELPGGGAGG MGGHIGFAPM FAGHAAAAIP 240 GLELGLSQEG HIGVLSHRLL STCYHHICFC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G27010.1	7e-40	TCP family protein

Link Out ? help Back to Top
Ensembl	TRIDC3AG061680.4