PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC3AG062200.5

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

MYB

Protein Properties

Length: 124aa MW: 14864.1 Da PI: 11.1621

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC3AG062200.5	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	52.8	9.2e-17	4	49	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg W + Ed +l ++v+++G+ +W++Ia+++ gR++k+c++rw++ TRIDC3AG062200.5 4 RGHWRPAEDMKLRELVALYGPQNWNLIAEKLD-GRSGKSCRLRWFNQ 49 899***************************.*********996 PP
2	Myb_DNA-binding	55.2	1.7e-17	57	99	2	46
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +++ eE+e+l a++ +G++ W+ Iar ++ gRt++ +k++w+ TRIDC3AG062200.5 57 RPFSDEEEERLMAAHRFYGNK-WSMIARLFP-GRTDNAVKNHWHV 99 68*****************.*****.*********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 124 aa Download sequence
HAARGHWRPA EDMKLRELVA LYGPQNWNLI AEKLDGRSGK SCRLRWFNQL DPRISKRPFS 60 DEEEERLMAA HRFYGNKWSM IARLFPGRTD NAVKNHWHVI MARKYREQSI AYRRRKLNQA 120 FITV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69560.1	1e-72	MYB family protein

Link Out ? help Back to Top
Ensembl	TRIDC3AG062200.5