PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3AG062380.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family Trihelix
Protein Properties Length: 202aa    MW: 22443.3 Da    PI: 6.5308
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3AG062380.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix68.11.7e-212999173
          trihelix  1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrts 73
                      rWt++e+l+Li+a+r +e+r  +      +W+ vs+++r++g+er+p qC+++w nl+++ kki ++ekk+++
  TRIDC3AG062380.1 29 RWTRHETLVLIQAKRVTEQRAAQ--PVRLKWAVVSAYCRRHGVERGPMQCRKRWGNLSWDLKKIVAWEKKHAA 99
                      8****************998655..5899*****************************************954 PP
Sequence ? help Back to Top
Protein Sequence    Length: 202 aa     Download sequence    
FEPKEEMMSA NGDSPAGAAV TTPRSRLPRW TRHETLVLIQ AKRVTEQRAA QPVRLKWAVV  60
SAYCRRHGVE RGPMQCRKRW GNLSWDLKKI VAWEKKHAAA VAAVAGDADS AAPERESFWD  120
MRGEERRARQ LPSSFDREVY DAIVGAGGAA NQLKPDSAEE MELADDADEH PPSPMMVMPI  180
QARVLRSGDG ERQEAGVGQE LD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G33550.16e-35Trihelix family protein