PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3AG062540.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bHLH
Protein Properties Length: 254aa    MW: 26960.8 Da    PI: 6.7663
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3AG062540.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH37.25.3e-1266108754
                       HHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
               HLH   7 erErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 
                       ++ErrRR+++N+++  Lr+++Pk +      K++ a+iL  A++Y+k+L
  TRIDC3AG062540.2  66 MAERRRRKKLNDRLYMLRSVVPKiS------KMDRASILGDAIDYLKEL 108
                       79*********************66......****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 254 aa     Download sequence    
PLSAFGDGMG WDDENELDQQ SVDASSLGVS ASLENAVVGA PGGGGGGGGG GNGKGKKKGM  60
PAKNLMAERR RRKKLNDRLY MLRSVVPKIS KMDRASILGD AIDYLKELLQ RISDLHSELE  120
SAPSSAALGG PSTANSFLPS TPTLQPFPGR IKEERCPPAP FPSPSGQQAT VEVRMREGQA  180
VNIHMFCARR PGILLSTMRA LDSLGLDIEQ AVISCFDGFA MDVFRAEQCR DGPGLLPEEI  240
KAVLLHCAGL QNAM
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
15674KKKGMPAKNLMAERRRRKK
26875ERRRRKKL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G12860.13e-90bHLH family protein