PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC3AG062540.3

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

bHLH

Protein Properties

Length: 314aa MW: 32805.2 Da PI: 6.1411

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC3AG062540.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	36.7	7.4e-12	139	181	7	54
HHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS HLH 7 erErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 ++ErrRR+++N+++ Lr+++Pk + K++ a+iL A++Y+k+L TRIDC3AG062540.3 139 MAERRRRKKLNDRLYMLRSVVPKiS------KMDRASILGDAIDYLKEL 181 79*******************66......**************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 314 aa Download sequence
SASLLMSMEH AALFDYNAAF PSSSSSAAAA PPAYHDFGSG GNPFNVDAPP FLLEPPPPLT 60 AAPGGQKGGF LAPPLSAFGD GMGWDDENEL DQQSVDASSL GVSASLENAV VGAPGGGGGG 120 GGGGNGKGKK KGMPAKNLMA ERRRRKKLND RLYMLRSVVP KISKMDRASI LGDAIDYLKE 180 LLQRISDLHS ELESAPSSAA LGGPSTANSF LPSTPTLQPF PGRIKEERCP PAPFPSPSGQ 240 QATVEVRMRE GQAVNIHMFC ARRPGILLST MRALDSLGLD IEQAVISCFD GFAMDVFRAE 300 VPMQGRPWAP AGGN

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	129	147	KKKGMPAKNLMAERRRRKK
2	141	148	ERRRRKKL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G12860.1	7e-80	bHLH family protein

Link Out ? help Back to Top
Ensembl	TRIDC3AG062540.3