PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC3AG064320.7

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

HB-other

Protein Properties

Length: 1201aa MW: 131634 Da PI: 7.3192

Description

HB-other family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC3AG064320.7	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	24.9	3.5e-08	6	62	1	57
TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS Homeobox 1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 +++R ++++ ++ +++lF+ + ++ ++e +e+++ +gLt +qV+++F +R++ +k TRIDC3AG064320.7 6 KKPRDLLNPKAVNFMQSLFAVKDTLGKRETREISALCGLTVTQVRFFFASQRTRVRK 62 7999**************************************************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 1201 aa Download sequence
SIKIGKKPRD LLNPKAVNFM QSLFAVKDTL GKRETREISA LCGLTVTQVR FFFASQRTRV 60 RKAVRLSREK ALKLEASKTA LKLEASKTAT NVCSLNSEQT PLDIETHAQV VEPLSTLEPL 120 EMFQSSSQLV EVPQSSLQQP EVQQCTATPI PITPTGTIQP TDAKINPDSV QKETKQEEVA 180 PGVESEDKKF LDSIFALMRK EETFSGQVKL MEWILQINNA TILSWFLTMG GLTIVSTWLS 240 QAATEEQTTV ILVIFKVLLH LPLHKALPAH MSVVLQTINR LRFYRTQDIS GRARNLLSRL 300 SKVLVRSQAS KKPQKDLICK QRISEILHDE SWKSEVDITE EILALTEGAS ESRKPEPKKT 360 PLLLTASADE SYKKSPVQTK SKERRKVQLV EHPNRKAAGK NAHSARTICT NNSRPLSADD 420 IQKAKMRAMF MQEKYGKVDT SKVSDKPETT ENKKPSGLVN SNEPPMPRSP LTSTAKQPVD 480 PSPSTSIQNA VPLSDNPEIL ATPKLNIALR ETPIEKLDSK RVHWQIPPEV WIDPSWSVSA 540 GENSKELDVQ AQRNRREKET FYASPKDIPS NPKDPWDSEM DFDDSLTPEI PIEQPPDADT 600 MEVDSVGAAP PNMVVPGEIQ QVGSTSSSSL TVASGANGAA SEPDLELLAV LLKNPQLVFA 660 LSSNEVGNLP TEQTVALLDM LKQTGLGLSE LVNSLPNGAG VPNKPESVPE TIPTSLPSPT 720 PPKDLPASVG WRSDFPTHVR APNLQQAQLP NNGNTPFASE VHQSFSNVVS PLPSQPYTSV 780 SALPAHIQSN APSLQSQSAI SVNSLTQYAA PVNNMLDRTL VHQHTQPYGL ASDHAAVAIH 840 QQPAVNKPAH EFQNMSNSGL ARSLTPEPNA AYATFPWQSG AATVASTGRS TTPDQWADRV 900 TNSYNDASAP YLNQSAYSNQ SSYDAYGSST SASSQGLNRN GYTQTTSEYQ MLGRNVRQRH 960 SLSPEPGSAR VYGGTPGYIP EVSKLGNYGQ QSYNPPVASR DWSSGQQSYT PAEPSRDWNS 1020 GQQSYTPAEP SSDWSSVQQS YTSAELSRDR RSGQQGYTPV EPSRQWSSGQ QSYTPAEPSR 1080 QWSSGQQGYT PAEPSNQWSS GQQGYTPAGP SNHRSSGQQG YTPAEPSRQW SSAQQGYTPS 1140 DPSVQQGYTP AEPSRPWSTA SQGAQNPDTS RQWSGAGKQD YYNTPSDGRS PYDQRRRRRW 1200 E

Sequence ? help Back to Top

Protein Sequence Length: 1201 aa Download sequence

SIKIGKKPRD LLNPKAVNFM QSLFAVKDTL GKRETREISA LCGLTVTQVR FFFASQRTRV  60
RKAVRLSREK ALKLEASKTA LKLEASKTAT NVCSLNSEQT PLDIETHAQV VEPLSTLEPL  120
EMFQSSSQLV EVPQSSLQQP EVQQCTATPI PITPTGTIQP TDAKINPDSV QKETKQEEVA  180
PGVESEDKKF LDSIFALMRK EETFSGQVKL MEWILQINNA TILSWFLTMG GLTIVSTWLS  240
QAATEEQTTV ILVIFKVLLH LPLHKALPAH MSVVLQTINR LRFYRTQDIS GRARNLLSRL  300
SKVLVRSQAS KKPQKDLICK QRISEILHDE SWKSEVDITE EILALTEGAS ESRKPEPKKT  360
PLLLTASADE SYKKSPVQTK SKERRKVQLV EHPNRKAAGK NAHSARTICT NNSRPLSADD  420
IQKAKMRAMF MQEKYGKVDT SKVSDKPETT ENKKPSGLVN SNEPPMPRSP LTSTAKQPVD  480
PSPSTSIQNA VPLSDNPEIL ATPKLNIALR ETPIEKLDSK RVHWQIPPEV WIDPSWSVSA  540
GENSKELDVQ AQRNRREKET FYASPKDIPS NPKDPWDSEM DFDDSLTPEI PIEQPPDADT  600
MEVDSVGAAP PNMVVPGEIQ QVGSTSSSSL TVASGANGAA SEPDLELLAV LLKNPQLVFA  660
LSSNEVGNLP TEQTVALLDM LKQTGLGLSE LVNSLPNGAG VPNKPESVPE TIPTSLPSPT  720
PPKDLPASVG WRSDFPTHVR APNLQQAQLP NNGNTPFASE VHQSFSNVVS PLPSQPYTSV  780
SALPAHIQSN APSLQSQSAI SVNSLTQYAA PVNNMLDRTL VHQHTQPYGL ASDHAAVAIH  840
QQPAVNKPAH EFQNMSNSGL ARSLTPEPNA AYATFPWQSG AATVASTGRS TTPDQWADRV  900
TNSYNDASAP YLNQSAYSNQ SSYDAYGSST SASSQGLNRN GYTQTTSEYQ MLGRNVRQRH  960
SLSPEPGSAR VYGGTPGYIP EVSKLGNYGQ QSYNPPVASR DWSSGQQSYT PAEPSRDWNS  1020
GQQSYTPAEP SSDWSSVQQS YTSAELSRDR RSGQQGYTPV EPSRQWSSGQ QSYTPAEPSR  1080
QWSSGQQGYT PAEPSNQWSS GQQGYTPAGP SNHRSSGQQG YTPAEPSRQW SSAQQGYTPS  1140
DPSVQQGYTP AEPSRPWSTA SQGAQNPDTS RQWSGAGKQD YYNTPSDGRS PYDQRRRRRW  1200
E

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G02560.2	1e-103	HB-other family protein

Link Out ? help Back to Top
Ensembl	TRIDC3AG064320.7